DRSC/TRiP Functional Genomics Resources

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Protein Alignment ken and mamo

DIOPT Version :9

Sequence 1:NP_523833.1 Gene:ken / 37785 FlyBaseID:FBgn0011236 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster


Alignment Length:473 Identity:105/473 - (22%)
Similarity:155/473 - (32%) Gaps:181/473 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 PQNLEPDQTLKYEVDSVDESRNAADFSSAFNSNDNCESAAECERSGGHNNKEEDEDDCT------ 208
            |...:..:.|:..|    :....||..||       ||.|        |:.||.|.|.|      
  Fly  1228 PMLADEGEDLRVNV----KREGTADEQSA-------ESRA--------NDLEEHEQDNTVDSAGI 1273

  Fly   209 ---HKDNKSDKDTDEIVNLSNAPPSGTSGSNSNIST-----SSNHQQQQHH--------HHHHHN 257
               ::||.|            :..:.||.:..|||:     |:|.:.:.||        |||||:
  Fly  1274 TMLYQDNNS------------SASASTSATEPNISSSDGIHSTNKRSRLHHLETDPSYPHHHHHH 1326

  Fly   258 HNNNNNNNNNNSSSSTINPV--------NLSLDLRTKSENSASRTLGSGSDHSGIDLAVTASEST 314
            |::::...::.:.....||.        ::||.|        ..|..:||..|....||.|:...
  Fly  1327 HHHHHQQQHHQAQHQHHNPQSQLPTHLGHVSLPL--------VATSAAGSSSSAAAAAVVAAAQA 1383

  Fly   315 KRKGLFFDSHKDVMKPLSDGSDINSSPENYVVTPHRKRRPGFHNTQSDNQPFTSYPHSLLEELRL 379
            :            :...:.||....|           ..||..|..|...               
  Fly  1384 Q------------VSSGATGSGATGS-----------GAPGSGNVGSAGS--------------- 1410

  Fly   380 AKSTTSPISGFGSEKNMLAHLEDGALNGDTLTPDRKHLLEAQRNRAQSPEIPMHLGPQFVYQWQS 444
                    ||.|...:.|:.|..              |:.|:|       ||   ..||:     
  Fly  1411 --------SGAGGGISSLSSLTS--------------LINAER-------IP---NEQFL----- 1438

  Fly   445 NQNAAMSAMPNLQSRLSSLSHISLNLDHPEGRSGSASGSGANLAGSNTHASSVREYRCEYCGKQF 509
                      .|..:.:|:.:. |.:|..|.:......:.              .:.|.:|||..
  Fly  1439 ----------GLNPQEASILNF-LRVDAAERQRDKRPATS--------------RFACPFCGKCV 1478

  Fly   510 GMSWNLKTHLRVHTGEKPFACRLCVAMFKQKAHLLKHLCSVHRNVITTTNGADTENRYSCCFCSM 574
            ....|||.|:|.||||:||.|..|...|..|:.|.:|| .:|..          |..|.|..|..
  Fly  1479 RSKENLKLHVRKHTGERPFVCLFCGRAFGGKSDLTRHL-RIHTG----------ERPYHCESCGK 1532

  Fly   575 CFESVQELVRHLSGH-HN 591
            ||.....|.:||:.| ||
  Fly  1533 CFARADYLSKHLTTHIHN 1550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kenNP_523833.1 BTB 27..>107 CDD:279045
BTB 34..>107 CDD:197585
zf-C2H2 500..522 CDD:278523 9/21 (43%)
C2H2 Zn finger 502..522 CDD:275368 9/19 (47%)
zf-H2C2_2 514..539 CDD:290200 14/24 (58%)
C2H2 Zn finger 530..551 CDD:275368 7/20 (35%)
C2H2 Zn finger 569..589 CDD:275368 7/19 (37%)
mamoNP_572932.2 BTB 21..118 CDD:279045
BTB 32..118 CDD:197585
C2H2 Zn finger 1082..1105 CDD:275368
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523 9/21 (43%)
C2H2 Zn finger 1471..1491 CDD:275368 9/19 (47%)
zf-H2C2_2 1483..1506 CDD:290200 13/22 (59%)
C2H2 Zn finger 1499..1519 CDD:275368 7/20 (35%)
zf-H2C2_2 1511..1536 CDD:290200 10/35 (29%)
C2H2 Zn finger 1527..1547 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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