DRSC/TRiP Functional Genomics Resources

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Protein Alignment ken and Cph

DIOPT Version :10

Sequence 1:NP_523833.1 Gene:ken / 37785 FlyBaseID:FBgn0011236 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001356899.1 Gene:Cph / 31660 FlyBaseID:FBgn0029939 Length:1254 Species:Drosophila melanogaster


Alignment Length:476 Identity:100/476 - (21%)
Similarity:150/476 - (31%) Gaps:164/476 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 RDRADRRKQQYTSPQNLEPDQTLKYEVDSVDESRNAADFSSAFNSNDNCESAAECERSGGHNNKE 201
            |..||.:..|.........|.....|.|: ||..|..:........||     :.:..|..:.::
  Fly   768 RSPADDQDNQDNQDDGSNADSLETNEADN-DEDPNPDESEEELGDGDN-----DPDGDGDLDGED 826

  Fly   202 EDED---DCTHKDNKSD--KDTDEIVNLSNAPPSGTSGSN------------SNISTSSNHQQQQ 249
            ||||   :|...|.|::  ..::.|...|.:|.:.:||:.            |||:..|...:| 
  Fly   827 EDEDELEECEDMDYKAEDLSVSNRIDGKSQSPKTTSSGATSLVGELMDKFGLSNIAQYSEAYKQ- 890

  Fly   250 HHHHHHHNHNNNNNNNNNNSSSSTINPVNLSLDLRTKSENSASRTLGSGSDHSGIDLAVTASEST 314
                                          :|....:.|.:|:..           .|..|:::.
  Fly   891 ------------------------------ALQESGRKEAAAAAA-----------AAAAAADNN 914

  Fly   315 KRKGLFFDSHKDVMKPLSDGSDINSSPENYVVTPHRKRRPGFHNTQSDNQPFTSYPHSLLEELRL 379
            .|.|        ...||||  .:|..|                                :..|||
  Fly   915 NRGG--------AGAPLSD--KLNGLP--------------------------------VAALRL 937

  Fly   380 AKSTTSPISGFGSEKNMLAHLEDGALNGDTLTPDRKHLLEAQRNRAQ-SPEIPMHLGPQFVYQWQ 443
            ...       |....||....:||.      .|.:..|.....|..: |..:.|..|..:.....
  Fly   938 RDE-------FAKNCNMFQQPQDGG------APSQVPLFNPFPNPFELSKRMKMDGGDWWGMSQA 989

  Fly   444 SNQNAAMSAMPNLQSRLSSLSHISLNLDHPEGRSGSASGSGANLAGSNT--------HASSVREY 500
            .::|.|:  ..||:.:             |.|           |.|:|:        ..|..|..
  Fly   990 LHRNEAL--FENLKLK-------------PLG-----------LGGANSLIQGPLLKKESRQRND 1028

  Fly   501 RCEYCGKQFGMSWNLKTHLRVHTGEKPFACRLCVAMFKQKAHLLKHLCSVHRNVITTTNGADTEN 565
            .||:|||.|....||..|.|.||||||:.|.||.....|.:.|.:|:         .|:|...::
  Fly  1029 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM---------KTHGRTGKD 1084

  Fly   566 RYSCCFCSMCFESVQELVRHL 586
            .|.|.||.|.|.....|.:|:
  Fly  1085 VYRCRFCDMPFSVPSTLEKHM 1105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kenNP_523833.1 BTB_POZ_BAB-like 32..117 CDD:349624
zf-C2H2 500..522 CDD:395048 10/21 (48%)
C2H2 Zn finger 502..522 CDD:275368 10/19 (53%)
zf-H2C2_2 514..539 CDD:463886 13/24 (54%)
C2H2 Zn finger 530..551 CDD:275368 6/20 (30%)
C2H2 Zn finger 569..589 CDD:275368 7/18 (39%)
CphNP_001356899.1 zf-C2H2 717..739 CDD:395048
C2H2 Zn finger 719..739 CDD:275368
zf-H2C2_2 731..756 CDD:463886
C2H2 Zn finger 747..767 CDD:275368
zf-C2H2 1029..1050 CDD:395048 10/20 (50%)
C2H2 Zn finger 1030..1050 CDD:275368 10/19 (53%)
zf-H2C2_2 1042..1067 CDD:463886 13/24 (54%)
C2H2 Zn finger 1058..1078 CDD:275368 6/28 (21%)
C2H2 Zn finger 1088..1106 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

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