DRSC/TRiP Functional Genomics Resources

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Protein Alignment ken and Bcl11b

DIOPT Version :10

Sequence 1:NP_523833.1 Gene:ken / 37785 FlyBaseID:FBgn0011236 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_038968327.1 Gene:Bcl11b / 314423 RGDID:1311128 Length:884 Species:Rattus norvegicus


Alignment Length:480 Identity:104/480 - (21%)
Similarity:157/480 - (32%) Gaps:129/480 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 CESAAECERSGGHNNKEEDEDDCTHKDNKSDKDTDEIVNLSNAPPSGTSGSNSNISTSSNHQQQQ 249
            |..|::.:|   |....      .||.......:|:.::.:::|..|||....::..:..     
  Rat   463 CSQASKLKR---HMKTH------MHKAGSLAGRSDDGLSAASSPEPGTSELPGDLKAADG----- 513

  Fly   250 HHHHHHHNHNNNNNNNNNNSSSSTINPVNLSLDLRTKSENSASRTLGSGSDH----------SGI 304
            ...||..:.:......::.........:.|..:.|.:|..|....||.|.::          :|.
  Rat   514 DFRHHESDPSLGPEPEDDEDEEEEEEELLLENESRPESSFSMDSELGRGRENGGGVPPGVAGAGA 578

  Fly   305 DLAVTASEST-------------------KRKGLFFDSHKDVMKPLSDGSDINSSPENYVVTPHR 350
            ..|..|.|..                   :::|.|       :|...|..|..:........|..
  Rat   579 AAAALADEKALALGKVMEDAGLGALPQYGEKRGAF-------LKRAGDAGDTGAGGCGDAGAPGA 636

  Fly   351 KR------RPGFHNTQSDNQPFTS-YPHSLLEELRLAKSTTSPISGFGSEKNMLAHLEDGALNGD 408
            ..      .||       .:||.: :|.         |....|..|.|               |.
  Rat   637 VNGRGGAFAPG-------AEPFPALFPR---------KPAPLPSPGLG---------------GP 670

  Fly   409 TLTPDRKHLLEAQRNRAQSPEIPMHLGPQFVY-QWQSNQNAAMSAM-------------PNLQSR 459
            .|...::..:|.......:..||    .:.|| ||.....|:...|             |...|.
  Rat   671 ALHAAKRIKVEKDLELPPAALIP----SENVYSQWLVGYAASRHFMKDPFLGFTDARQSPFATSS 731

  Fly   460 LSSLSHISLNLDHP---------EGRSGSAS-GSGANLAGSNTHASSVREYR----CEYCGKQFG 510
            ..|..:.||....|         .||||:|| ||..:|.|......|.:|.|    ||||||.|.
  Rat   732 EHSSENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFK 796

  Fly   511 MSWNLKTHLRVHTGEKPFACRLCVAMFKQKAHLLKHLCSVHRNVITTTNGADTENRYSCCFCSMC 575
            ...||..|.|.||||:|:.|.||.....|.:.|.:|:         .|:|...:..|.|..|.|.
  Rat   797 NCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM---------KTHGQIGKEVYRCDICQMP 852

  Fly   576 FESVQELVRHLSGHHNNLLLTKNLR 600
            |.....|.:|:...|...|||.:::
  Rat   853 FSVYSTLEKHMKKWHGEHLLTNDVK 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kenNP_523833.1 BTB_POZ_BAB-like 32..117 CDD:349624
zf-C2H2 500..522 CDD:395048 12/25 (48%)
C2H2 Zn finger 502..522 CDD:275368 11/19 (58%)
zf-H2C2_2 514..539 CDD:463886 12/24 (50%)
C2H2 Zn finger 530..551 CDD:275368 6/20 (30%)
C2H2 Zn finger 569..589 CDD:275368 6/19 (32%)
Bcl11bXP_038968327.1 KREPA <146..>267 CDD:483960
zf-C2H2 427..448 CDD:395048
C2H2 Zn finger 428..448 CDD:275370
zf-H2C2_2 440..465 CDD:463886 1/1 (100%)
C2H2 Zn finger 456..476 CDD:275370 4/15 (27%)
zf-C2H2 787..808 CDD:395048 11/20 (55%)
C2H2 Zn finger 788..808 CDD:275368 11/19 (58%)
zf-H2C2_2 800..825 CDD:463886 12/24 (50%)
C2H2 Zn finger 816..836 CDD:275368 6/28 (21%)
C2H2 Zn finger 846..864 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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