DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpbeta and acaa1

DIOPT Version :9

Sequence 1:NP_477378.1 Gene:Mtpbeta / 37784 FlyBaseID:FBgn0025352 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001002207.1 Gene:acaa1 / 431754 ZFINID:ZDB-GENE-040704-48 Length:418 Species:Danio rerio


Alignment Length:457 Identity:152/457 - (33%)
Similarity:217/457 - (47%) Gaps:65/457 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RKVQCRALSAAVANPQPKQKNSQNIVLVDGVRTPF-LTSGTTYSKLMPHELARHSLLSLLQKNRL 83
            |::..|..||..|||       .:||:|.|:||.. .....::....|.||....:.::::...|
Zfish    15 RRMGLRQCSATAANP-------NDIVVVHGLRTAIGRAKRGSFKDTTPDELLSAVMSAVIKDVGL 72

  Fly    84 DKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTMACISSNAAITTGMGLIATNTYD 148
            ...|:..:..|:|:|....:.:||.|...:||....|.:||...|.|...|:....|.|...:||
Zfish    73 KPSLLGDVCVGNVLQPGAGALMARVAHFFSGFPESVPVYTVNRQCSSGLQALFNIAGGIRGGSYD 137

  Fly   149 VIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKTLGQRLALLSTFRPDFLAPELPAVAEFSSGETM 213
            :.:|.|||.||             |...|....:..||......| |.:.|             |
Zfish   138 LGLACGVESMS-------------LRSPNNPGDISPRLMDNEKAR-DCIIP-------------M 175

  Fly   214 GHSADRLASAFNVSRSEQDEYALRSHTLAKEAQEKGYF-TDLVPFKVSGVDQ-------IVDKDN 270
            |.:::.:|..|.::|.:||.:||.|...|..||:.|.| .::.|.....|::       .|.||:
Zfish   176 GITSENVAERFGITREKQDRFALSSQQKAAMAQKNGIFDQEITPVTTKFVEENGTERTITVTKDD 240

  Fly   271 GIRVSSP-ESLAKLRPAFVKPYGTVTAANASFLTDGASACIIMTEEKAKQLGLKPKAYLRDFLFV 334
            |||..:. |.|||||||| |..|:.||.|||.::|||:|.:|......::|||.....||....|
Zfish   241 GIRPGTTLEGLAKLRPAF-KDTGSTTAGNASQVSDGAAAVLIGRRSAVEKLGLPVFGVLRASAVV 304

  Fly   335 SQDPVNQLLLGPAYGIPKLLKKAGLTLKDIDSWEIHEAFAGQIVANLKALDSDWFCKTYLGLNEK 399
            ...| :.:.:||||.||:.||.||||:.|||.:||:||||.|.|          :|.      ||
Zfish   305 GVPP-DVMGIGPAYAIPEALKLAGLTVDDIDVFEINEAFASQAV----------YCV------EK 352

  Fly   400 VGTPDLSKWNNWGGSLSIGHPFAATGVRLCMHTANRLVREDGK-LGVVAACAAGGQGVAMLIERY 463
            :|.| :.|.|..||:::.|||...||.|..:...|.|.|...: .|||:.|...|.|.|.:.| |
Zfish   353 LGIP-MEKVNPNGGAIAFGHPLGCTGARQVVTLLNELKRRRKRGFGVVSMCIGTGMGAAAVFE-Y 415

  Fly   464 PG 465
            ||
Zfish   416 PG 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpbetaNP_477378.1 fadI 44..462 CDD:181597 141/428 (33%)
thiolase 45..462 CDD:238383 140/427 (33%)
acaa1NP_001002207.1 PLN02287 1..414 CDD:215161 148/451 (33%)
thiolase 33..415 CDD:238383 141/428 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1129049at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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