DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpbeta and Acaa1a

DIOPT Version :10

Sequence 1:NP_477378.1 Gene:Mtpbeta / 37784 FlyBaseID:FBgn0025352 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_036621.2 Gene:Acaa1a / 24157 RGDID:67379 Length:434 Species:Rattus norvegicus


Alignment Length:451 Identity:153/451 - (33%)
Similarity:224/451 - (49%) Gaps:58/451 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ALSAAVANPQPKQKNSQNIVLVDGVRTPFLTSGT-TYSKLMPHELARHSLLSLLQKNRLDKELID 89
            ||.||..:....|.::.::|:|.|.|||...:|. .:....|.||....|.::||..:|..|.:.
  Rat    30 ALQAAPCSASFPQASASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLG 94

  Fly    90 YIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTMACISSNAAITTGMGLIATNTYDVIVAGG 154
            .|..|:|::....:.:||.|...:|.....|...|...|.|...|:....|.|...:||:.:|.|
  Rat    95 DISVGNVLEPGAGAVMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACG 159

  Fly   155 VEFMSDVPIRHSRKMRSLLLKANKAKTLGQRLALLSTFRPDFLAPELPAVAEFSSGETMGHSADR 219
            ||.||.....:...:.|.||:::||:              |.|.|             ||.:::.
  Rat   160 VESMSLSNRGNPGNISSRLLESDKAR--------------DCLIP-------------MGITSEN 197

  Fly   220 LASAFNVSRSEQDEYALRSHTLAKEAQEKGYF-TDLVPFKVSGVDQ-------IVDKDNGIRVSS 276
            :|..|.:||.:||.:||.|...|..||.||.| .::||...:.:|.       .|.:|.|:|.|:
  Rat   198 VAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGDRKTITVSQDEGVRPST 262

  Fly   277 P-ESLAKLRPAFVKPYGTVTAANASFLTDGASACIIMTEEKAKQLGLKPKAYLRDFLFVSQDPVN 340
            . |.||||:||| |..|:.||.|:|.::|||:|.::....||::|||.....||.:..|...| :
  Rat   263 TMEGLAKLKPAF-KDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPP-D 325

  Fly   341 QLLLGPAYGIPKLLKKAGLTLKDIDSWEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGTPDL 405
            .:.:||||.||..|:|||||:.|||.:||:||||.|.:          :|.      ||:|.| .
  Rat   326 IMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAL----------YCV------EKLGIP-A 373

  Fly   406 SKWNNWGGSLSIGHPFAATGVRLCMHTANRLVREDGK-LGVVAACAAGGQGVAMLIERYPG 465
            .|.|..||::::|||...||.|..:...|.|.|...: .|||:.|...|.|.|.:.| |||
  Rat   374 EKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRAYGVVSMCIGTGMGAAAVFE-YPG 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpbetaNP_477378.1 thiolase 45..462 CDD:238383 144/427 (34%)
Acaa1aNP_036621.2 PLN02287 9..430 CDD:215161 149/445 (33%)
PTS2-type peroxisomal targeting signal. /evidence=ECO:0000269|PubMed:1680677 11..36 4/5 (80%)

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