Sequence 1: | NP_001163280.1 | Gene: | TBPH / 37781 | FlyBaseID: | FBgn0025790 | Length: | 531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_014518.1 | Gene: | HRP1 / 853997 | SGDID: | S000005483 | Length: | 534 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 528 | Identity: | 124/528 - (23%) |
---|---|---|---|
Similarity: | 189/528 - (35%) | Gaps: | 151/528 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 EEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGVRSNEGRLFPPSVESGWGEYAYFCVFP----- 79
Fly 80 ---KENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKD 141
Fly 142 TKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVK--VPNSKGMGHQVPCKVFVGRCTEDIN 204
Fly 205 SDDLREYFSKFGEVTDVFI-----PRPFRAFSFVTFLDPDVAQSLCGEDHI-IKGVSVHVSNAAP 263
Fly 264 KAEQNRNQQVQSYNYNSANSFGMHSYHPQGNHMNPGRNGHHRGNNQHNAHGGENAIVPNNHNIGT 328
Fly 329 AGYGMGGNNYGGNSG--GGYHNNGGNHSSGGNT---NRQDGGSQYNSRQSNFHGMNQPHNGNVGG 388
Fly 389 SNGW---------MNRGHLDMPNL----QALGIN--------SQGS--------SSSNQGQNMSN 424
Fly 425 QSMLNLNSLPINPALVAAALNQWSLVGNQLQNQNQDQ----QGGNFLSWMAQNGGHNNANNFGGR 485
Fly 486 KGPNNPNN 493 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TBPH | NP_001163280.1 | RRM1_TDP43 | 108..184 | CDD:240767 | 30/77 (39%) |
RRM2_TDP43 | 192..261 | CDD:240768 | 19/74 (26%) | ||
HRP1 | NP_014518.1 | PABP-1234 | <144..463 | CDD:130689 | 96/396 (24%) |
RRM1_Hrp1p | 161..236 | CDD:409991 | 29/74 (39%) | ||
RRM2_Hrp1p | 244..321 | CDD:409767 | 21/81 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |