Protein Alignment TBPH and AT1G22910

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_973889.1
• Gene: AT1G22910 / 838898
• AraportID: AT1G22910
• Length: 347
• Species: Arabidopsis thaliana
• Alignment Length: 307
• Identity: 72/307 - (23%)
• Similarity: 110/307 - (35%)
• Gaps: 125/307 - (40%)

  Fly   107 TDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTN-RHL 170
            |.:.|.||.|:|.:|:::::||.:||:|.|.:..|..||:|||:|||.|...:|......: ..:
plant    13 TKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSACVDATPV 77

  Fly   171 IDGRW--CEV----------KVPNSKGMGHQVPCKVFVGRCTEDINSDDLREYFSK----FGEVT 219
            ||||.  |.:          ..||..|.|.              ||  ::|...|.    ||.
plant    78 IDGRRANCNLASLGLQRSKPSTPNHGGGGR--------------IN--NMRVMMSTMQTGFGP-- 124

  Fly   220 DVFIPRPFRAFSFVTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSF 284
                |.|.:..:|..:  |.:..:|.|           .|..:|           .|:....|.:
plant   125 ----PPPPQPPTFTHY--PHLPLNLFG-----------YSPYSP-----------DYSSFPTNLY 161

  Fly   285 GMHSYHPQGNHMNPGRNGHHRGNNQHNAHGGENAIVPNNHNIGTAGYGMGGNNYGGNSGGG---- 345
            ||:..                      ..||:              ||:.||.   |||||
plant   162 GMYGC----------------------TSGGQ--------------YGVYGNR---NSGGGGLTA 187

  Fly   346 -------YHNNGGNHSSGGNTNRQDGGSQYNSRQSNFHGMN--QPHN 383
                   ::..||.|          ||.|::..|..:|.::  .||:
plant   188 AAASATPFYPCGGGH----------GGVQFSQPQPFYHHLSSYNPHH 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833
		RRM1_TDP43	108..181	CDD:409760	28/85 (33%)
		RRM2_TDP43	192..261	CDD:409761	13/72 (18%)
AT1G22910	NP_973889.1	RRM_RBM24_RBM38_like	13..88	CDD:409818	29/74 (39%)