Protein Alignment TBPH and AT1G17640

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_173208.1
• Gene: AT1G17640 / 838341
• AraportID: AT1G17640
• Length: 369
• Species: Arabidopsis thaliana
• Alignment Length: 320
• Identity: 92/320 - (28%)
• Similarity: 136/320 - (42%)
• Gaps: 43/320 - (13%)

  Fly   109 LIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDG 173
            |.|.|:.|:||.|:...||..:|||:.:.|..|..:|..:|||||.|.......:||...|:||.
plant    68 LFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDD 132

  Fly   174 RWCEVKVPNSKG------MGHQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPF----- 227
            |..::|....:|      .......|:|||.....:..|:|:.||..:|::.:..|....
plant   133 RKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRS 197

  Fly   228 RAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFGMHSYH 290
            |.|.||||...|....|.  |:.|.:....|.:..|.||         ::...||..|:|....:
plant   198 RGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPK---------RTGRDNSFRSYGASGKY 253

  Fly   291 PQGNHMNPGRNGHHRGNNQHNAHGGENAIVPNN--HNIGTAGYGMGGNNYGGNSGGGYHNNGGNH 353
            .|.:..:...|..:...:.:..:||..|...|:  :..|..||| ||..||...||...|.|  :
plant   254 DQEDSYSGKANEDYSMYSGYGGYGGYGAYAGNSMVNPAGFYGYG-GGYGYGYGYGGQMFNMG--Y 315

  Fly   354 SSGGNTNRQDGGSQYNSRQSNFHGMNQPH-NGNVGGSNGWMNRGHLDMPNLQALGINSQG 412
            .:||.::.   ||.|....:..:|..:.| |||.|.|:|..|            |.|..|
plant   316 GAGGYSHM---GSGYGVAAAAAYGGGKSHGNGNNGSSSGKGN------------GTNGSG 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833
		RRM1_TDP43	108..181	CDD:409760	28/71 (39%)
		RRM2_TDP43	192..261	CDD:409761	21/75 (28%)
AT1G17640	NP_173208.1	RRM_SF	68..138	CDD:473069	27/69 (39%)
		RRM_SF	158..236	CDD:473069	22/77 (29%)