Protein Alignment TBPH and AtRZ-1c

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_196048.1
• Gene: AtRZ-1c / 830307
• AraportID: AT5G04280
• Length: 310
• Species: Arabidopsis thaliana
• Alignment Length: 342
• Identity: 65/342 - (19%)
• Similarity: 103/342 - (30%)
• Gaps: 127/342 - (37%)

  Fly   109 LIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDG 173
            :.|.||..:.|:..|...|..:|::|..||..:..:|:|:||||:.|....|....:...|
plant     9 IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREMH---- 69

  Fly   174 RWCEVKVPNSKGMGHQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPFRAFSFVTFLDP 238
                     .:..|.:|   :.|.|....:..||...:.|:.|.
plant    70 ---------GRDFGDRV---ISVNRAEPKLGRDDGESHGSRGGR--------------------- 101

  Fly   239 DVAQSLC---------------GEDHIIK-GVSVHVSNAAPKAEQNRNQQVQSYN---------- 277
            |...|:.               |||...| |...|.:...|.|...|...|..::
plant   102 DSGYSIAGKGSFGGGGGGGGRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSD 166

  Fly   278 ----------------------YNSANSFG-------MHSYHPQGNHMN----------PGRNGH 303
                                  |:.|..:|       ..:|.|:..:.:          .|.:.:
plant   167 GRVDRYADRDRYVDRERYIDDRYDGAARYGARDRFDSREAYIPRDRYASDRYAAPADRFAGGDRY 231

  Fly   304 HRGNNQH------NAHGGENAIVPNNHNIGTAGYGMGGNNYGGNSGGGYHNNGGNHSSGGNT--- 359
            .||::::      .|...|..|.|:          .|.:.|||...||....||....|..:
plant   232 SRGSDRYPPGSYDKARSFERDIAPS----------AGSDRYGGGRAGGPIRGGGEEGRGFRSRAG 286

  Fly   360 ------NRQDGGSQYNS 370
                  :|..||..|.|
plant   287 APYERPSRSGGGGAYPS 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833
		RRM1_TDP43	108..181	CDD:409760	19/71 (27%)
		RRM2_TDP43	192..261	CDD:409761	14/84 (17%)
AtRZ-1c	NP_196048.1	RRM	8..89	CDD:440488	23/95 (24%)
		zf-CCHC	128..143	CDD:395050	3/14 (21%)
		U2AF_lg	170..>256	CDD:273727	11/85 (13%)