Protein Alignment TBPH and AT4G36960

DIOPT Version :9

• Sequence 1: NP_001163280.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_001154290.1
• Gene: AT4G36960 / 829850
• AraportID: AT4G36960
• Length: 379
• Species: Arabidopsis thaliana
• Alignment Length: 169
• Identity: 54/169 - (31%)
• Similarity: 88/169 - (52%)
• Gaps: 10/169 - (5%)

  Fly   109 LIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDG 173
            |:|||:||....:.|::|...:|::....:.||..:|:|:|||:|.|.|.:.....|...|.:..
plant     5 LVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALKGEHFLGN 69

  Fly   174 RWCEVKVPNSKGMGHQVPCK----VFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPF-----RA 229
            |..||||...|....| |.|    :||.|....::..|.|.:|.::||:||:::|:.:     |.
plant    70 RILEVKVATPKEEMRQ-PAKKVTRIFVARIPSSVSESDFRSHFERYGEITDLYMPKDYNSKQHRG 133

  Fly   230 FSFVTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKAEQN 268
            ..|:||...|..:.|..:.|.:.|.:|.|..|.||.:.:
plant   134 IGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDH 172

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_001163280.1	RRM1_TDP43	108..184	CDD:240767	26/74 (35%)
		RRM2_TDP43	192..261	CDD:240768	22/77 (29%)
AT4G36960	NP_001154290.1	RRM_SF	4..77	CDD:418427	25/71 (35%)
		PABP-1234	5..>378	CDD:130689	54/169 (32%)
		RRM_SF	91..166	CDD:418427	21/74 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1425837at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920