Protein Alignment TBPH and AT4G26650

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_567753.1
• Gene: AT4G26650 / 828772
• AraportID: AT4G26650
• Length: 455
• Species: Arabidopsis thaliana
• Alignment Length: 513
• Identity: 130/513 - (25%)
• Similarity: 199/513 - (38%)
• Gaps: 138/513 - (26%)

  Fly    79 PKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTK 143
            |:|.|.:|..:|..                |.:.|:.|.|.||.|:|||..||:::.|.|.:|..
plant     3 PEEQKMESASDLGK----------------LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRT 51

  Fly   144 SGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVK--VPNSKGM---GHQVPC----------- 192
            :|:::||||:.|.......||:.::|:||||..|.|  ||.....   .|..|.
plant    52 TGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNG 116

  Fly   193 ------KVFVGRCTEDINSDDLREYFSKFGEVTDVFI------PRPFRAFSFVTF-LDPDVAQSL 244
                  |:|||.....|...:.:.||.:||.:.||.:      .|| |.|.|:|| .:..|...|
plant   117 GGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRP-RGFGFITFDSEESVDMVL 180

  Fly   245 CGEDHIIKGVSVHVSNAAPK----AEQNRNQQV---QSY----NYNSANSFGMHSYHPQGNHMNP 298
            ....|.:.|..|.|..|.||    ...||:..:   .:|    |.:||||: .:|:.|..|:.|.
plant   181 HKTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSY-FNSFPPGYNNNNL 244

  Fly   299 GRNGHHR--GNNQHNAHGGENAIVPNNHNIGTAGYGMGGN-------NYGGNSGGGYHNNGGNHS 354
            |..|...  |:       |.||.         :.:|:|.|       |:.||:.|.....|..:.
plant   245 GSAGRFSPIGS-------GRNAF---------SSFGLGLNQELNLNSNFDGNTLGYSRIPGNQYF 293

  Fly   355 SGGNTNRQDGGSQYNSRQSNFHGMNQPHNGNVGGSN--GW-------MNRGHLDMPNLQALGINS 410
            :..:.||.:....||...|.::..|:...||...|:  ||       .|||:        .|::|
plant   294 NSASPNRYNSPIGYNRGDSAYNPSNRDLWGNRSDSSGPGWNLGVSVGNNRGN--------WGLSS 350

  Fly   411 QGSSSSNQGQNMSNQSMLNLNSLPINPALVAAALNQWSLVGNQLQNQNQDQQGGNFL-------- 467
            ..|.::..|::..                ..:.|:..|..||   ....|...|...
plant   351 VVSDNNGYGRSYG----------------AGSGLSGLSFAGN---TNGFDGSIGELYRGSSVYSD 396

  Fly   468 -SWMAQNGGHNNANNFGGRK-----GPNNPNNNPAANGIKTDNSEPQNGNTGWSNQSS 519
             :|......|.::|...|..     |.:|..::|:||.     ||..:||....|:.:
plant   397 STWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANA-----SEGYSGNYNVGNRQT 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833
		RRM1_TDP43	108..181	CDD:409760	30/74 (41%)
		RRM2_TDP43	192..261	CDD:409761	24/92 (26%)
AT4G26650	NP_567753.1	RRM1_hnRNPA_hnRNPD_like	17..87	CDD:409763	29/69 (42%)
		RRM2_Hrp1p	123..200	CDD:409767	25/77 (32%)
		ser_rich_anae_1	<204..>385	CDD:468206	49/224 (22%)