Protein Alignment TBPH and PSRP2

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_566958.3
• Gene: PSRP2 / 824379
• AraportID: AT3G52150
• Length: 253
• Species: Arabidopsis thaliana
• Alignment Length: 233
• Identity: 56/233 - (24%)
• Similarity: 93/233 - (39%)
• Gaps: 51/233 - (21%)

  Fly    54 RSNEGRLFPPSVESGWGEYAYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKT 118
            ||:..|..|            :.|...|.|..:   |:.|:...:|:         .:..:|...
plant    47 RSSRTRFIP------------YAVTETEEKPAA---LDPSSEAARRV---------YIGNIPRTV 87

  Fly   119 TEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVL--TNRHLIDGRWCEVKV- 180
            |.|.|.:..|.:|.|...|:..|..||:|:.|||....|.:....|:  .|.:.::||  |:||
plant    88 TNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGR--EIKVN 150

  Fly   181 ----PNSKGMGHQV-----------PCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPR----- 225
                |.:......|           |.||:||...:.:..:.|...||:.|:|....:.|
plant   151 ITEKPIASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTS 215

  Fly   226 PFRAFSFVTF-LDPDVAQSLCG-EDHIIKGVSVHVSNA 261
            ....|.|||| .:.||..::.. .:.:::|..:.|:.|
plant   216 KSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833	4/23 (17%)
		RRM1_TDP43	108..181	CDD:409760	23/79 (29%)
		RRM2_TDP43	192..261	CDD:409761	19/75 (25%)
PSRP2	NP_566958.3	RRM1_PSRP2_like	77..156	CDD:410188	24/89 (27%)
		RRM2_PSRP2	175..253	CDD:410189	20/77 (26%)