Protein Alignment TBPH and AT3G47120

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_190296.1
• Gene: AT3G47120 / 823865
• AraportID: AT3G47120
• Length: 352
• Species: Arabidopsis thaliana
• Alignment Length: 338
• Identity: 77/338 - (22%)
• Similarity: 124/338 - (36%)
• Gaps: 80/338 - (23%)

  Fly    80 KENKRKSDDNLENST---AKTKRIETRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKD 141
            |.|.|:||..:.:..   ||.|      ....:.|.|:|:..||..|...|..|||::...:.:|
plant    12 KINARESDLGISDEASWHAKYK------NSAYVYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRD 70

  Fly   142 TKSGQSKGFGFVRFGSYDAQMRVL-----TNRHLIDGR-----WC-----------EVKVPNSKG 185
            ..:|:||||.|:   :|:.|...:     .|..|:.||     .|           |.:..|.:.
plant    71 KGTGKSKGFAFL---AYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREA 132

  Fly   186 MGHQVPCKVFV-GRCTE----DINSDDLREYFSKFGEVTDVFIPRPFRAFSFVTFLDPD---VAQ 242
            .|   .|:.|. |.||.    ..:.|:.|...:.:|...|       |:..:    |.|   ..:
plant   133 RG---VCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEED-------RSSKW----DHDKNREGR 183

  Fly   243 SLC-----GEDHIIKGVSVHVSNAAPKA-------EQNRNQQVQSYNYNSANSFGMHSYHPQGNH 295
            .:|     ||  ..:|.|...|:...:|       |::|:.:......|.|...|. |:..:|:.
plant   184 GVCRAFQRGE--CTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLNGAKKGGT-SFGNRGDF 245

  Fly   296 MNPGRNGHHRGNNQHNAHGG---ENAIVPNNHNIGTA---GYGMGGNNYGGNSGGGYHNNGGNHS 354
            ........:||....:|..|   |...| :..::|..   .|.|......|.....|..   .|:
plant   246 KPDVEEKSYRGRGDGDASYGRPKERERV-DREDMGPRSRDAYDMKEQKRSGRYDNAYSR---RHN 306

  Fly   355 SGGNTNRQDGGSQ 367
            ...:..|:|.||:
plant   307 DEIDYVREDKGSR 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833
		RRM1_TDP43	108..181	CDD:409760	25/93 (27%)
		RRM2_TDP43	192..261	CDD:409761	18/81 (22%)
AT3G47120	NP_190296.1	RRM_ist3_like	27..115	CDD:409845	27/96 (28%)
		PABP-1234	38..>310	CDD:130689	65/295 (22%)