Protein Alignment TBPH and ATRZ-1A

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_189273.1
• Gene: ATRZ-1A / 822246
• AraportID: AT3G26420
• Length: 245
• Species: Arabidopsis thaliana
• Alignment Length: 267
• Identity: 61/267 - (22%)
• Similarity: 99/267 - (37%)
• Gaps: 55/267 - (20%)

  Fly   105 RCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLT--N 167
            ||   .:.||.|.|::..||:.||.||.::.|::..|..||:|:||||:.|....|....:.  |
plant     8 RC---FIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMN 69

  Fly   168 RHLIDGRWCEVKVPNSKGMGHQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPFRAFSF 232
            ...:|||...|    .|...||       |....|.:.|..|:.    |...|...|...|.
plant    70 GMDLDGRTITV----DKAQPHQ-------GGAGRDNDGDRGRDR----GYDRDRSRPSGGRG--- 116

  Fly   233 VTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFGMHSYHPQGNHMN 297
                         |.|....|...|.:...| :|.:|:              |...:..:.:..:
plant   117 -------------GGDCFKCGKPGHFARECP-SESSRD--------------GGGRFSSKDDRYS 153

  Fly   298 PGRNGHHRGNNQHNAHGGENAIVPNNHNIGTAGYGMGGNNYGGNSGGG--YHNNGGNHSSGGNTN 360
            ...:.:...::::.|.........:.::.....|....:.||...|||  |..:.....:||.:
plant   154 SKDDRYGAKDDRYGAKEDRYGAKDDRYSSKDDRYSSKDDRYGSRDGGGSRYGPDRSGERAGGRS- 217

  Fly   361 RQDGGSQ 367
             :||||:
plant   218 -RDGGSR 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833
		RRM1_TDP43	108..181	CDD:409760	26/74 (35%)
		RRM2_TDP43	192..261	CDD:409761	12/68 (18%)
ATRZ-1A	NP_189273.1	RRM2_NsCP33_like	8..83	CDD:410187	28/81 (35%)
		ZnF_C2HC	120..135	CDD:197667	3/15 (20%)
		U2AF_lg	136..>242	CDD:273727	17/104 (16%)
		PRK04537	<208..240	CDD:235307	6/18 (33%)