Protein Alignment TBPH and AT3G15010

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_188119.1
• Gene: AT3G15010 / 820730
• AraportID: AT3G15010
• Length: 404
• Species: Arabidopsis thaliana
• Alignment Length: 418
• Identity: 102/418 - (24%)
• Similarity: 164/418 - (39%)
• Gaps: 87/418 - (20%)

  Fly    40 LKYRNLDTKAVRGVRSNEGRLFPPSVESGWGEYAYFCVFPKENKRKSD--------DNLENSTAK 96
            :|.|.||... .|:.:|.|....|:..|           |::.::..:        |.|:.:..:
plant     4 MKKRKLDENG-NGLNTNGGGTIGPTRLS-----------PQDARKIIERFTTDQLLDLLQEAIVR 56

  Fly    97 TKRIETRLRCT--------DLIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFV 153
            ...:...:|.|        .|.:.||...||.|.||..|.:||::..|.:..|..:|:|||:|||
plant    57 HPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFV 121

  Fly   154 RFGSYDAQMRVLTN-RHLIDGR--WCEVKVPNSKGMGHQVP----CKVFVGRCTEDINSDDLREY 211
            .|...|..:..|.. ...||||  ..::....::|.|.|:.    .|::|.....|:.:|.|..:
plant   122 TFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNH 186

  Fly   212 FSKFGEVTDVFIPRPF-------RAFSFVTFLDPDVAQ-SLCGEDHIIKGVSVHVSNAAPKAEQN 268
            |..:|:|.:.  |..|       |.|:...:...:.|| :|.....:|.|..::...|....:..
plant   187 FMAYGDVEEG--PLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGG 249

  Fly   269 RNQQVQSYNYNSANSF----GMHSYHPQGNH-----------MNPGRNGHHRGNNQHNAHGGENA 318
            :....|:.:..|.:..    ||....|.|.:           .:.|...||. |:.|::.|
plant   250 KPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGISAYGGYSGGPPAHHM-NSTHSSMG---- 309

  Fly   319 IVPNNHNIGTAGYGMGGNNYGGNSGGG-YHNNGGNHSSGGNTNRQDGGSQYNSRQSNF-HGMNQP 381
                   :|:||||.....|||..|.| |...||.:...|.     |..||....|:. .|...|
plant   310 -------VGSAGYGGHYGGYGGPGGTGVYGGLGGGYGGPGT-----GSGQYRMPPSSMPGGGGYP 362

  Fly   382 HNGNVG--GSNGWMNRGHLDMPNLQALG 407
            .:|:.|  .|.|:..:.|      ||:|
plant   363 ESGHYGLSSSAGYPGQHH------QAVG 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833	9/37 (24%)
		RRM1_TDP43	108..181	CDD:409760	27/75 (36%)
		RRM2_TDP43	192..261	CDD:409761	17/76 (22%)
AT3G15010	NP_188119.1	RRM_SF	75..150	CDD:473069	27/74 (36%)
		RRM2_NsCP33_like	168..242	CDD:410187	17/75 (23%)