Protein Alignment TBPH and AT2G22100

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_565526.1
• Gene: AT2G22100 / 816745
• AraportID: AT2G22100
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 312
• Identity: 70/312 - (22%)
• Similarity: 103/312 - (33%)
• Gaps: 98/312 - (31%)

  Fly    78 FPKENKRK-----SDDNLENSTAKT-----KRIETRLRCTD-------LIVLGLPWKTTEESLRE 125
            |.||:.:.     |.:.|.|...||     |.|.......|       :.|.||.|.||.|:|:.
plant   117 FDKEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFESADRDSSQRNIFVRGLGWDTTHENLKA 181

  Fly   126 YFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVKVPNSKGMGHQV 190
            .||.|||:....:..|..:|::||||||.|.:.......|.|             |..:.....|
plant   182 AFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAALKN-------------PEKRMYNRTV 233

  Fly   191 PCKVFVGRCTEDINSDDLREY----------FSKFGEVTDVFIPRPFRAFSFVTFLDPDVAQSLC 245
            .|..     ....||...||.          .|..|..:::.:|
plant   234 SCLP-----ARPFNSGKPREQQQPVESVKIDLSHTGNQSEMALP--------------------- 272

  Fly   246 GEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFGMHSYHP----------QGNHMNPG- 299
                     .:.:.:...|..| :.|.:..|...:...:| ||..|          .||.|..|
plant   273 ---------GIDLGHGLDKGHQ-QQQNMSMYAGQNMPFYG-HSQPPPGFNPMYGAMMGNPMVAGL 326

  Fly   300 RNGHHRGNNQHNAHGGENAIVPNNHNIGTAGYGMGGNNY-----GGNSGGGY 346
            :|....|:...|    :..::|.|| :|..|..:|..|.     |..:|.|:
plant   327 QNYRMFGSGMMN----QGPMMPPNH-MGMVGQYVGDGNVNGVGAGAGAGAGF 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833	70/312 (22%)
		RRM1_TDP43	108..181	CDD:409760	25/79 (32%)
		RRM2_TDP43	192..261	CDD:409761	8/78 (10%)
AT2G22100	NP_565526.1	PABP-1234	<164..>353	CDD:130689	53/243 (22%)
		RRM_SF	165..235	CDD:473069	26/82 (32%)