Protein Alignment TBPH and AT2G16940

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_001189538.1
• Gene: AT2G16940 / 816197
• AraportID: AT2G16940
• Length: 610
• Species: Arabidopsis thaliana
• Alignment Length: 231
• Identity: 59/231 - (25%)
• Similarity: 96/231 - (41%)
• Gaps: 39/231 - (16%)

  Fly    72 YAYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMA 136
            |||   :.|.:|.|.:|.:|......:...|      :....:..:.||..:.|:|...|:|...
plant   205 YAY---WRKRHKDKKEDKVEPEADPERDQRT------VFAYQIALRATERDVYEFFSRAGKVRDV 260

  Fly   137 QIKKDTKSGQSKGFGFVRFGSYDAQ---MRVLTNRHLIDGRWCEVKVPNSK-----------GMG 187
            :|..|..|.:|:|.|:|.|  ||..   |.:..:...:.|:...||...::           |.|
plant   261 RIIMDRISRRSRGIGYVEF--YDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAG 323

  Fly   188 HQV------PCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP----FRAFSFVTFL---DPD 239
            ..:      ..:::||....:::.||||:.|..||.|..|.:||.    .:.|.||.|.   |..
plant   324 GMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDAR 388

  Fly   240 VAQSLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQS 275
            .|.:|.|:.. |.|.::.||....:.|.....|.|:
plant   389 NALNLNGQLE-IAGRAIKVSAVTDQTEVPEAGQTQT 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833	3/5 (60%)
		RRM1_TDP43	108..181	CDD:409760	20/75 (27%)
		RRM2_TDP43	192..261	CDD:409761	25/75 (33%)
AT2G16940	NP_001189538.1	SF-CC1	30..607	CDD:273721	59/231 (26%)