DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBPH and Dazap1

DIOPT Version :10

Sequence 1:NP_477400.1 Gene:TBPH / 37781 FlyBaseID:FBgn0025790 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001365924.1 Gene:Dazap1 / 70248 MGIID:1917498 Length:407 Species:Mus musculus


Alignment Length:252 Identity:85/252 - (33%)
Similarity:113/252 - (44%) Gaps:44/252 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 LIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNR-HLID 172
            |.|.||.|.||:|:||.||..||||:...|.||..:.||:|||||:|...:....||.:| |.:|
Mouse    12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLD 76

  Fly   173 GRWCEVKVPNSKGM---------GHQ--------VPCKVFVGRCTEDINSDDLREYFSKFGEVTD 220
            ||..:.|....:||         |.|        ...|:|||....:....:|||||.|||.||:
Mouse    77 GRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTE 141

  Fly   221 VFI------PRPFRAFSFVTFLD-PDVAQSLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNY 278
            |.:      .|| |.|.|:||.| ..|.|::....|.|.|..|.|..|.|:..:|     |:...
Mouse   142 VVMIYDAEKQRP-RGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKN-----QAPGQ 200

  Fly   279 NSANSFGMHSYHPQGNHMNPGRNGHHRGN---NQHNAHGGENAIVPNNHNIGTAGYG 332
            ..|:.:        |:.:.|.......|.   .....:|.:...||....||  |||
Mouse   201 PGASQW--------GSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIG--GYG 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBPHNP_477400.1 TDP43_N 3..78 CDD:465833
RRM1_TDP43 108..181 CDD:409760 35/72 (49%)
RRM2_TDP43 192..261 CDD:409761 30/75 (40%)
Dazap1NP_001365924.1 RRM1_DAZAP1 11..92 CDD:409988 37/79 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..117 9/42 (21%)
RRM2_DAZAP1 111..190 CDD:409765 31/79 (39%)
Blue background indicates that the domain is not in the aligned region.

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