Sequence 1: | NP_001163280.1 | Gene: | TBPH / 37781 | FlyBaseID: | FBgn0025790 | Length: | 531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001247303.1 | Gene: | msi / 43087 | FlyBaseID: | FBgn0011666 | Length: | 634 | Species: | Drosophila melanogaster |
Alignment Length: | 498 | Identity: | 107/498 - (21%) |
---|---|---|---|
Similarity: | 176/498 - (35%) | Gaps: | 108/498 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 DEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGVRSNEGRLFPPSVESGWGEYAYFC 76
Fly 77 VFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKD 141
Fly 142 TKSGQSKGFGFVRFGSYDAQMRVL-TNRHLIDGRWCEVKVPNSKGMGHQV--PCKVFVGRCTEDI 203
Fly 204 NSDDLREYFSKFGEVTDVFI-----PRPFRAFSFVTFLDPDVAQSLCG-EDHIIKGVSVHVSNAA 262
Fly 263 PK-----AEQNRNQQVQSYNYN-----------SANSFGMHSYHPQGNHMNP---------GRNG 302
Fly 303 HHRGNNQHNAHGGENAI----VPNN---------------HNIGTAGYGMGGNNYGGNSGGGYHN 348
Fly 349 NGGNHSSGGNTNRQDGGSQYNSRQSNFHGMNQPHNGNVGGSNGWMNRGHLDMPN----------- 402
Fly 403 --LQALGINSQGSSSSNQGQNMSNQSMLNLNSLPINPALVAAA 443 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TBPH | NP_001163280.1 | RRM1_TDP43 | 108..184 | CDD:240767 | 27/76 (36%) |
RRM2_TDP43 | 192..261 | CDD:240768 | 24/74 (32%) | ||
msi | NP_001247303.1 | RRM1_hnRNPA_hnRNPD_like | 205..276 | CDD:240771 | 26/70 (37%) |
RRM2_MSI | 292..365 | CDD:240769 | 24/72 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |