Sequence 1: | NP_001163280.1 | Gene: | TBPH / 37781 | FlyBaseID: | FBgn0025790 | Length: | 531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476935.1 | Gene: | Rbp4 / 41668 | FlyBaseID: | FBgn0010258 | Length: | 428 | Species: | Drosophila melanogaster |
Alignment Length: | 404 | Identity: | 92/404 - (22%) |
---|---|---|---|
Similarity: | 151/404 - (37%) | Gaps: | 107/404 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 109 LIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNR---HL 170
Fly 171 IDGRWCEVK--VPNSK-----GMGHQV---PC--------KVFVGRCTEDINSDDLREYFSKFGE 217
Fly 218 VTDV--FIPRPF---RAFSFVTFLDPDVAQ-SLCGEDHIIKGVSVHVSNAAPKAEQN-------- 268
Fly 269 --------RNQQVQSYNYNSAN----------------SFGMHSYHPQGNHMNPGRNGHHRGNNQ 309
Fly 310 HNAHGGENAIVPN----NHNIGTAGYGMGGNNYGGNSGGGYHNNGGNHSSGGNTNRQDGGSQYNS 370
Fly 371 RQSNFHGMNQ--PHNGNVGGSNGWMNRGHLDMPNLQALGINSQGSSSSNQGQNMSNQSMLNLNSL 433
Fly 434 PINPALVAAALNQW 447 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TBPH | NP_001163280.1 | RRM1_TDP43 | 108..184 | CDD:240767 | 27/79 (34%) |
RRM2_TDP43 | 192..261 | CDD:240768 | 27/82 (33%) | ||
Rbp4 | NP_476935.1 | RRM_SF | 33..110 | CDD:302621 | 26/77 (34%) |
RRM2_hnRNPA_like | 137..209 | CDD:240774 | 25/71 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |