Sequence 1: | NP_001163280.1 | Gene: | TBPH / 37781 | FlyBaseID: | FBgn0025790 | Length: | 531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259974.1 | Gene: | Rbp9 / 33498 | FlyBaseID: | FBgn0010263 | Length: | 684 | Species: | Drosophila melanogaster |
Alignment Length: | 575 | Identity: | 131/575 - (22%) |
---|---|---|---|
Similarity: | 200/575 - (34%) | Gaps: | 176/575 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 72 YAYFCVFPKENKRKSDD-----NLENSTAK---TKRIETRLRCTDLIVLGLPWKTTEESLREYFE 128
Fly 129 TYGEVLMAQIKKDTKSGQSKGFGFVRF-------------------------------------- 155
Fly 156 -----GSYDAQMRVLTNR-------------------HLIDGRWCEV----------KVPNSKGM 186
Fly 187 GHQVPCK---VFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPF-----RAFSFVTFLDPDVA-- 241
Fly 242 --QSLCGEDHIIKGVSVHVSNAAPKAEQNRNQQ-------VQSYNYN------SANSFGMHSYHP 291
Fly 292 QGNHMNPGRNGHHRGNNQHNAHGGENAIVPNNHNIGTAGYGMGGNNYGGNSGGGYHNNGGNHSSG 356
Fly 357 GNTNRQDGGSQYNSRQSNFHGMNQPHN--GNVGGSNGWMNRGHLDMPNLQALGINSQGSSSSN-- 417
Fly 418 ------QGQNMSNQSMLNLNSLPINPALV-AAALNQWSLVGNQLQNQNQDQQGGNFLSWMA---- 471
Fly 472 ---QNGGHNNAN--NFGGRKGPN-NPNNNPAANGIKTDNSEPQNGNTG----WSN 516 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TBPH | NP_001163280.1 | RRM1_TDP43 | 108..184 | CDD:240767 | 28/147 (19%) |
RRM2_TDP43 | 192..261 | CDD:240768 | 21/80 (26%) | ||
Rbp9 | NP_001259974.1 | ELAV_HUD_SF | 107..438 | CDD:273741 | 59/291 (20%) |
RRM1_Hu | 109..186 | CDD:241094 | 7/32 (22%) | ||
RRM2_Hu | 196..274 | CDD:241096 | 20/77 (26%) | ||
RRM3_Hu | 355..432 | CDD:240823 | 21/83 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439643 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |