Protein Alignment TBPH and fne

DIOPT Version :9

• Sequence 1: NP_001163280.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Alignment Length: 294
• Identity: 65/294 - (22%)
• Similarity: 108/294 - (36%)
• Gaps: 93/294 - (31%)

  Fly    92 NSTAKTKRIETRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKS------------ 144
            |.:......|:|   |:|||..||...|:|.:|..|.:.||:...::.:|..|
  Fly    14 NGSVDGSNDESR---TNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTAL 75

  Fly   145 ------GQSKGFGFVRF-GSYDAQMRVLTNRHLIDGRWCEVKV-------PNS---KGMGHQVPC 192
                  |||.|:|||.: .:.||:..|.|    ::|...:.||       |:|   ||      .
  Fly    76 NPALQQGQSLGYGFVNYVRAEDAEKAVNT----LNGLRLQNKVIKVSYARPSSESIKG------A 130

  Fly   193 KVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPFRAFSFVTFLDPDVAQSLCGEDHIIKGVSVH 257
            .::|....::::..||...|:.||::.                    .::.||..   |.|:|..
  Fly   131 NLYVSGLPKNLSQPDLEGMFASFGKII--------------------TSRILCDN---ISGLSKG 172

  Fly   258 VS-------NAAPKAEQNRNQQVQ---------SYNYNSANSFGMHSYHPQGNHMNPGRNGHHR- 305
            |.       |.|.:|.|..|.:..         .:..|.:||.......|...::.|......|
  Fly   173 VGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRR 237

  Fly   306 --------GNNQHNAHGGE---NAIVPNNHNIGT 328
                    |..:::...|:   |:|:|.|...|:
  Fly   238 LAGALPSAGRIRYSPLAGDLLANSILPGNAMTGS 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_001163280.1	RRM1_TDP43	108..184	CDD:240767	29/104 (28%)
		RRM2_TDP43	192..261	CDD:240768	12/75 (16%)
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	64/285 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439642
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930