Sequence 1: | NP_001163280.1 | Gene: | TBPH / 37781 | FlyBaseID: | FBgn0025790 | Length: | 531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
Alignment Length: | 402 | Identity: | 96/402 - (23%) |
---|---|---|---|
Similarity: | 143/402 - (35%) | Gaps: | 136/402 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 81 ENKRKSDDN--LENSTAKTKRIE--TRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKD 141
Fly 142 TKSGQSKGFGFVRF----GSYDAQMRV----LTNRHLIDGRWCEVKVPNSKGMGHQV-PCKVFVG 197
Fly 198 RCTEDINSDDLREYFSKFGEVT------DVFIPRPFRAFSFVTFLDPDVAQSLCGEDHIIKGVSV 256
Fly 257 HVSNAAPK----------AEQNRNQQVQSY-------------------------------NYNS 280
Fly 281 ANSFGMH---------------SYHPQ---------GNHMNPGRNGHHRGNNQHNAH--GGEN-- 317
Fly 318 ---AIVPNNHNIGTA-----GYGMGGNNYGGNSGGGYHNNGGNHSSGGNTNRQDGGSQYNSRQSN 374
Fly 375 FHGMNQPHNGNV 386 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TBPH | NP_001163280.1 | RRM1_TDP43 | 108..184 | CDD:240767 | 24/83 (29%) |
RRM2_TDP43 | 192..261 | CDD:240768 | 18/74 (24%) | ||
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 25/87 (29%) |
RRM_SF | 179..257 | CDD:302621 | 20/88 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439622 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |