Protein Alignment TBPH and Caper

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: XP_317010.4
• Gene: Caper / 1277542
• VectorBaseID: AGAMI1_007869
• Length: 595
• Species: Anopheles gambiae
• Alignment Length: 304
• Identity: 65/304 - (21%)
• Similarity: 108/304 - (35%)
• Gaps: 65/304 - (21%)

  Fly    22 DGTLLLSTLQAQFPGSCGLKYRNLDTKAVR-GVRSNEGRLFPPSVESGWGEYAYFCVFPKENKRK 85
            |..|:......:|.|...:::::.::.|:. |:...:....|.||:....|         :|:..
Mosquito   268 DVRLITCNKTKRFKGIAYIEFKDPESVALALGLSGQKLLGIPISVQHTQAE---------KNRMA 323

  Fly    86 SDDNLENSTAKTKRIETRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150
            |    :...|..|.....:|   |.|..|.:..||:.|...||.:|::...|:..|..:|:|||:
Mosquito   324 S----QPPVAPPKNPSGPMR---LYVGSLHFNITEDMLNGIFEPFGKIDNIQLIMDADTGRSKGY 381

  Fly   151 GFVRFGSYDAQMRVL--TNRHLIDGRWCEVKVPNSKGMGHQVPCKVFVGRCTE--------DINS 205
            ||:.|.:.|...:.|  .|...:.||                |.|  ||..||        .:::
Mosquito   382 GFITFHNADDAKKALEQLNGFELAGR----------------PMK--VGNVTERLDVTTHASLDT 428

  Fly   206 DDL------------REYFSKFGEVTDVFIPRPFRAFSFVTFLDPDVAQSLCGEDHIIKGVSVHV 258
            |::            .:...|..|...:.:||........|...|...|.:.....|.....:..
Mosquito   429 DEMDRSGIELGATGRLQLMFKLAEGAGLAVPRAAADALLATAPQPVPQQPIMQSPPIATQCFLLS 493

  Fly   259 SNAAPKAEQNRN--QQVQSYNYNSANSFG--MHSY----HPQGN 294
            :...|..|.|.|  .::|.......|..|  .|.|    .|.||
Mosquito   494 NMFDPATETNPNWDLEIQDDVIEECNKHGGVQHVYVDKQSPSGN 537

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833	10/56 (18%)
		RRM1_TDP43	108..181	CDD:409760	23/74 (31%)
		RRM2_TDP43	192..261	CDD:409761	14/88 (16%)
Caper	XP_317010.4	None