Protein Alignment TBPH and LOC1270267

DIOPT Version :10

• Sequence 1: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Sequence 2: XP_308949.5
• Gene: LOC1270267 / 1270267
• VectorBaseID: AGAMI1_007420
• Length: 271
• Species: Anopheles gambiae
• Alignment Length: 303
• Identity: 62/303 - (20%)
• Similarity: 96/303 - (31%)
• Gaps: 107/303 - (35%)

  Fly    51 RGVRSNEGRLFPPSVESG------WGEYAYFCVFPKENKRKSDDNLENST-------AKTKRIET 102
            |..|.:..|..|.:.|||      .|..|.:       :|.|.....:||       |.:.....
Mosquito    24 REYRDDSERYNPGTSESGRTPADYGGSSASY-------RRSSHHRSSHSTAHYHDPPASSSASGG 81

  Fly   103 RLRCTD----------LIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGS 157
            ...|:.          |.|..|...|||..|.:.|..:|.:....:..|.|:|:|:|||||.|.|
Mosquito    82 AHECSSHSGSSSGKVVLAVFNLSVYTTEAELYDTFSKFGPLRKTTVVLDAKTGRSRGFGFVYFES 146

  Fly   158 YDAQMRVLTNRHLIDGRWCEVKVPNSKGMGHQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVF 222
            .:                 :.||.:.:..|             .:|....:|..||...:..|
Mosquito   147 AE-----------------DAKVAHDQANG-------------IEIGDRRIRVDFSATNKPHD-- 179

  Fly   223 IPRPFRAFSFVTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKA-------------------EQN 268
             |.|...:..|:              |...|...|.|:....:                   |::
Mosquito   180 -PTPGVYYGKVS--------------HPKTGYGGHSSHGMASSHGYHHCRACEVEARERERWERD 229

  Fly   269 RNQQVQSYNYNSANSFGMHSYHPQG-NHMNPGRNG----HHRG 306
            ...:...|.|:|      :|.|.:. |....||:|    ::||
Mosquito   230 ARSREHYYYYDS------YSGHDRSRNRSMTGRSGRSSDYYRG 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833	9/32 (28%)
		RRM1_TDP43	108..181	CDD:409760	21/82 (26%)
		RRM2_TDP43	192..261	CDD:409761	12/68 (18%)
LOC1270267	XP_308949.5	None