DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBPH and eIF3g1

DIOPT Version :10

Sequence 1:NP_477400.1 Gene:TBPH / 37781 FlyBaseID:FBgn0025790 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_308202.3 Gene:eIF3g1 / 1269559 VectorBaseID:AGAMI1_005021 Length:271 Species:Anopheles gambiae


Alignment Length:254 Identity:51/254 - (20%)
Similarity:89/254 - (35%) Gaps:58/254 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VRSNEGRLFPPS--VESGW---GEYAY---------------------FCVFPKENKRKSDDNLE 91
            |.|:.|.|.|||  :|:|.   .||.|                     .||..:::..|..|:..
Mosquito    15 VESDSGSLPPPSEVIENGQKIVTEYKYNKDDKKVKVVRTYKISRVVVPKCVARRKSLAKFGDSAT 79

  Fly    92 NSTAKTKRIETRLRCTDLIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGF-VRF 155
            :......  :|.:...|:.:..:..|..|:......::...:    :|..|..|:...|.. .:.
Mosquito    80 DRPGPNP--QTTMVSEDVFMQFITNKEEEQKNENALDSMKNI----VKCRTCEGEHWSFHCPYKN 138

  Fly   156 GSYDAQMRVL------TNRHLIDGRWCEVKVPNSKG--------MGHQVPCKVFVGRCTEDINSD 206
            .:||...:..      |......|::....:..|:|        .|......:.:...:|.:...
Mosquito   139 SAYDKPTKPTTAPVPETTSSSKPGKYVPPHMKESQGKPGIGGAMRGRDDTSAIRISNLSEAMTEA 203

  Fly   207 DLREYFSKFGEVTDVFIPRP-----FRAFSFVTFLD-PDVAQSL-----CGEDHIIKGV 254
            ||.|...|||..|.:|:.|.     .:.|::|.|.. .|.|.::     .|.||:|..|
Mosquito   204 DLEELVKKFGPHTKMFLSRDKSTGLCKGFAYVHFRSRRDAATAIEVLNGYGYDHLILSV 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBPHNP_477400.1 TDP43_N 3..78 CDD:465833 13/50 (26%)
RRM1_TDP43 108..181 CDD:409760 11/79 (14%)
RRM2_TDP43 192..261 CDD:409761 20/74 (27%)
eIF3g1XP_308202.3 eIF3g 25..138 CDD:463545 19/118 (16%)
RRM_eIF3G_like 191..265 CDD:409842 20/72 (28%)

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