DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Tgfb2

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_112393.2 Gene:Tgfb2 / 81809 RGDID:70491 Length:442 Species:Rattus norvegicus


Alignment Length:316 Identity:88/316 - (27%)
Similarity:135/316 - (42%) Gaps:75/316 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 FDVSNV-PNDNYLVMAELRIYQNANEGKWLTANREFTITVYAI-GTGTLGQHTMEPLSS--VNTT 240
            ||||.: .|.:.||.||.|:::..|....:...|   |.:|.| .:..|...|...:.|  |.|.
  Rat   160 FDVSTMEKNASNLVKAEFRVFRLQNPKARVAEQR---IELYQILKSKDLTSPTQRYIDSKVVKTR 221

  Fly   241 GDYVG-WLELNVTEGLHEWLVKSKDNHGIYIGAHA------------VNRPDREVKLDDIGLIHR 292
            .:  | ||..:||:.:||||.....|.|..|..|.            :....:|::....|:   
  Rat   222 AE--GEWLSFDVTDAVHEWLHHKDRNLGFKISLHCPCCTFIPSNNYIIPNKSQELEARFAGI--- 281

  Fly   293 KVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRKKSVSPNNVPLLEP---MESTRS- 353
               |....:..|   ..:.||:|               ||:....:|:.:.:|.|   :||.:| 
  Rat   282 ---DGTSTYASG---DQKTIKST---------------RKKSSGKTPHLLLMLLPSYRLESQQSS 325

  Fly   354 -------------------CQMQTLYIDFK-DLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNAT 398
                               |.::.|||||| |||| .||..|:||.|.:|:|.|.:..::.   |
  Rat   326 RRRKRALDAAYCFRNVQDNCCLRPLYIDFKRDLGW-KWIHEPKGYNANFCAGACPYLWSSD---T 386

  Fly   399 NHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            .|..|.:|.:.:.|:....|||....|..|.:||::.: ...:::..|||||||.|
  Rat   387 QHTKVLSLYNTINPEASASPCCVSQDLEPLTILYYIGN-TPKIEQLSNMIVKSCKC 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 36/141 (26%)
TGF_beta_BMP5_like 353..455 CDD:381639 41/123 (33%)
Tgfb2NP_112393.2 TGFb_propeptide 21..256 CDD:459906 33/100 (33%)
TGF_beta_TGFB2 345..441 CDD:381655 39/100 (39%)

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