DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and mstnb

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_571094.2 Gene:mstnb / 798441 ZFINID:ZDB-GENE-990415-165 Length:374 Species:Danio rerio


Alignment Length:403 Identity:100/403 - (24%)
Similarity:154/403 - (38%) Gaps:98/403 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VSYEILEFLGIAERPTHLSSHQLSLRKSAPKF--LLDVYHRITAEEGLSDQDEDDDYERGHRSRR 126
            :..:||..|.:.:.|.........|...||..  |||.|      :.|.|..:|...|       
Zfish    57 IKSQILSKLRLKQAPNISRDVVKQLLPKAPPLQQLLDQY------DVLGDDSKDGAVE------- 108

  Fly   127 SADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDVSNVPNDNYL 191
                |:||....:..:|     ...|.|.|:        .||    ...:..:|..|.....|.:
Zfish   109 ----EDDEHATTETIMT-----MATEPDPIV--------QVD----RKPKCCFFSFSPKIQANRI 152

  Fly   192 VMAELRIY-QNANEGK--WLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYVGWLELNVTE 253
            |.|:|.:: :.|.|..  :|..:|     :..:..|  |:|.:..| .::.......|..::|.:
Zfish   153 VRAQLWVHLRPAEEATTVFLQISR-----LMPVKDG--GRHRIRSL-KIDVNAGVTSWQSIDVKQ 209

  Fly   254 GLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFM-IGFFRGPELIKATA- 316
            .|..||.:.:.|.||.|.|:.....|..|...:.|      :|...||| :....||:.|:..: 
Zfish   210 VLTVWLKQPETNRGIEINAYDAKGNDLAVTSTETG------EDGLLPFMEVKISEGPKRIRRDSG 268

  Fly   317 -----HSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPE 376
                 :||..|                               |....|.:||:|.|| ||||||:
Zfish   269 LDCDENSSESR-------------------------------CCRYPLTVDFEDFGW-DWIIAPK 301

  Fly   377 GYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNL 441
            .|.|.||||||::   .::....|.   .||:...|:....|||.||::..:.:||....|.:..
Zfish   302 RYKANYCSGECDY---MYLQKYPHT---HLVNKASPRGTAGPCCTPTKMSPINMLYFNGKEQIIY 360

  Fly   442 KKYRNMIVKSCGC 454
            .|..:|:|..|||
Zfish   361 GKIPSMVVDRCGC 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 55/246 (22%)
TGF_beta_BMP5_like 353..455 CDD:381639 39/102 (38%)
mstnbNP_571094.2 TGFb_propeptide 46..252 CDD:480997 53/242 (22%)
TGF_beta_GDF8 267..374 CDD:381658 42/145 (29%)

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