DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and TGFB1

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_011525544.1 Gene:TGFB1 / 7040 HGNCID:11766 Length:391 Species:Homo sapiens


Alignment Length:490 Identity:112/490 - (22%)
Similarity:185/490 - (37%) Gaps:140/490 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGLRNTSEAVAVLASLGLGMVLLMFVATTP--PAVEATQSGIYIDNGKDQTIMHRVLSEDDKLDV 64
            ||||          .|.|.:.||..:..||  ||     :|:......|..::.|...|    .:
Human     4 SGLR----------LLPLLLPLLWLLVLTPGRPA-----AGLSTCKTIDMELVKRKRIE----AI 49

  Fly    65 SYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSAD 129
            ..:||..|.:|..|:........|    |:.:|.:|:                   ..|.|.:.:
Human    50 RGQILSKLRLASPPSQGEVPPGPL----PEAVLALYN-------------------STRDRVAGE 91

  Fly   130 LEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHHNV-DELRHE-HGRRLWFDVSN----VPND 188
            ..|.|.|.:.::..         .::....:.:.|:.: |:.:.. |...::|:.|.    ||..
Human    92 SAEPEPEPEADYYA---------KEVTRVLMVETHNEIYDKFKQSTHSIYMFFNTSELREAVPEP 147

  Fly   189 NYLVMAELR-------------IYQNANEGKWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTT 240
            ..|..||||             :||..:...|                ..|....:.|       
Human   148 VLLSRAELRLLRLKLKVEQHVELYQKYSNNSW----------------RYLSNRLLAP------- 189

  Fly   241 GDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAH-AVNRPDREVKLD-----------DIGLIHRK 293
            .|...||..:||..:.:||.:..:..|..:.|| :.:..|..:::|           |:..||  
Human   190 SDSPEWLSFDVTGVVRQWLSRGGEIEGFRLSAHCSCDSRDNTLQVDINAGFTTGRRGDLATIH-- 252

  Fly   294 VDDEFQPFMIGFFRGPELIKAT--AHSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMEST-RSCQ 355
              ...:||:        |:.||  ..:.|.:|.|       .::::..|..     ..|| ::|.
Human   253 --GMNRPFL--------LLMATPLERAQHLQSSR-------HRRALDTNYC-----FSSTEKNCC 295

  Fly   356 MQTLYIDF-KDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPC 419
            ::.||||| ||||| .||..|:||.|.:|.|.|.:..:..   |.::.|..|.:...|.....||
Human   296 VRQLYIDFRKDLGW-KWIHEPKGYHANFCLGPCPYIWSLD---TQYSKVLALYNQHNPGASAAPC 356

  Fly   420 CAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            |.|..|..||::|::. ....:::..||||:||.|
Human   357 CVPQALEPLPIVYYVG-RKPKVEQLSNMIVRSCKC 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 51/291 (18%)
TGFB 354..455 CDD:214556 39/102 (38%)
TGFB1XP_011525544.1 TGFb_propeptide 30..262 CDD:395559 52/302 (17%)
TGF_beta_TGFB1 293..391 CDD:381654 39/103 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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