DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Bmp8a

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001102902.1 Gene:Bmp8a / 680931 RGDID:1585858 Length:399 Species:Rattus norvegicus


Alignment Length:426 Identity:143/426 - (33%)
Similarity:212/426 - (49%) Gaps:75/426 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLSLR-KSAPKFLLDVYHRITAEEGLSDQD 113
            |...|.|...::.|:..|||..||:..||...:....:.: .|||.|:||:||.:|         
  Rat    29 TCPQRRLGARERRDMQREILAVLGLPGRPRPRAPPAAARQPASAPLFMLDLYHAMT--------- 84

  Fly   114 EDDDYERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLN--KRHHNVDELRHEHGR 176
             |||               |.|..|.:         :..:|::|:|:|  :|...:. .:..|.:
  Rat    85 -DDD---------------DGGPPQAH---------LGRADLVMSFVNMVERDRTLG-YQEPHWK 123

  Fly   177 RLWFDVSNVPNDNYLVMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQHT------MEPLS 235
            ...||::.:|....:..||.|||:   |......|....|:::.:......:.:      ::.|.
  Rat   124 EFHFDLTQIPAGEAVTAAEFRIYK---EPSTHPPNTTLHISMFEVVQERSNRESDLFFLDLQTLR 185

  Fly   236 SVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDD--IGLIHRKVDDEF 298
            |    || .|||.|::|.....||:    ||...:|.......:....||.  .||:.:......
  Rat   186 S----GD-EGWLVLDITAASDRWLL----NHNKDLGLRLYVETEDGHSLDPGLAGLLGQTAPRSR 241

  Fly   299 QPFMIGFFRGPELIKATAHSSHHRSKRSA-----SHPRKRKKSVSPNNVP-LLEPMESTRS---C 354
            ||||:.|||        |.||..|:.|:.     ..|:|..:...||.:| :.:....:|.   |
  Rat   242 QPFMVTFFR--------ASSSPVRTPRAVRPLKRRQPKKTNELPHPNKLPGIFDDGHGSRGREVC 298

  Fly   355 QMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPC 419
            :...||:.|:||||.||:|||:||.|:||.|||.|||::.||||||||:|:||||::|..|||.|
  Rat   299 RRHELYVSFRDLGWLDWVIAPQGYSAYYCEGECAFPLDSCMNATNHAILQSLVHLMKPDVVPKAC 363

  Fly   420 CAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGCH 455
            ||||:|.|..|||:.:..||.|:|:|||:||:||||
  Rat   364 CAPTKLSATSVLYYDSSNNVILRKHRNMVVKACGCH 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 65/265 (25%)
TGFB 354..455 CDD:214556 62/100 (62%)
Bmp8aNP_001102902.1 TGFb_propeptide 32..248 CDD:279078 64/262 (24%)
TGF_beta 298..398 CDD:278448 61/99 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 172 1.000 Domainoid score I3618
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 260 1.000 Inparanoid score I3028
OMA 1 1.010 - - QHG47130
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 1 1.000 - - otm46154
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.980

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