DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Bmp8b

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_063144692.1 Gene:Bmp8b / 679119 RGDID:1591873 Length:465 Species:Rattus norvegicus


Alignment Length:392 Identity:114/392 - (29%)
Similarity:171/392 - (43%) Gaps:94/392 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 HRVLSEDDKLDVSYEILEFLGIAERP---THLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDE 114
            || |...:..|:..||.|.||:..||   ..|::.|..  .|||.|:|::||.:|.:.|      
  Rat    33 HR-LGVREPRDMQREIREVLGLPGRPRSRAPLATAQQP--ASAPLFMLNLYHAMTDDSG------ 88

  Fly   115 DDDYERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLN-KRHHNVDELRHEHGRRL 178
                               .|..|.:         :..:|:||:|:| ..|......:..|.:..
  Rat    89 -------------------NGPPQPH---------LHRADLIMSFVNIVEHDRTLGYQEPHWKEF 125

  Fly   179 WFDVSNVPNDNYLVMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQHT------MEPLSSV 237
            .||::.:|....:..||.|||:   |......|....|:::.:......:.:      ::.|.| 
  Rat   126 HFDLTQIPAGEAVTAAEFRIYK---EPSTHPPNTTLHISMFEVVQERSNRESDLFFLDLQTLRS- 186

  Fly   238 NTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDD--IGLIHRKVDDEFQP 300
               || .|||.|::|.....||:    ||...:|.......:....||.  .||:.:......||
  Rat   187 ---GD-EGWLVLDITAASDRWLL----NHNKDLGLRLYVETEDGHSLDPGLAGLLGQTAPRSRQP 243

  Fly   301 FMIGFFRGPELIKATAHSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRS------------ 353
            ||:|||:        |..|..|:.|:| .|.|:||....|.:|     .|.:.            
  Rat   244 FMVGFFK--------ASQSPVRAPRTA-RPLKKKKLNQVNQLP-----NSNKHLGIFDDGHGSLD 294

  Fly   354 ---CQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVH----LLE 411
               |:...||:.|:||||.|.:|||:||.|:||:|||.:|||:.||:||||.:|.||.    ||.
  Rat   295 REVCRRHELYVSFRDLGWLDSVIAPQGYSAYYCAGECIYPLNSCMNSTNHATMQALVSITVLLLG 359

  Fly   412 PK 413
            |:
  Rat   360 PE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 64/263 (24%)
TGF_beta_BMP5_like 353..455 CDD:381639 35/80 (44%)
Bmp8bXP_063144692.1 None

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