DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Inhbc

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_072136.1 Gene:Inhbc / 64549 RGDID:621194 Length:351 Species:Rattus norvegicus


Alignment Length:396 Identity:98/396 - (24%)
Similarity:151/396 - (38%) Gaps:103/396 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 LSSHQLSLRKSAPKFLLDVYH--------RITAEEGLSDQDEDDDYERGHRSRRSADLEEDEGEQ 137
            |.||:..|...|.|.:||..|        |..:.|.|...      .|..|..|:..|.|.:..|
  Rat    36 LESHRELLLDLAKKSILDKLHLSQRPILSRPVSREALKTA------LRRLRGTRAETLLEHDQRQ 94

  Fly   138 QKNFIT--DLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDVSNVPND----NYLVMAEL 196
            :...|:  |.....|:::.:...|.::....|:.|:    .|..|.:...||.    |..|:. |
  Rat    95 EYEIISFADTGLSNINQTRLEFHFSDRTTGGVEVLQ----TRFMFFMQLPPNTTQTMNIRVLV-L 154

  Fly   197 RIYQNANEGKWLTANREFTITVYAIG--TGTLGQHTMEPLSSVNTTGDYVGWLELNVTEGLHEWL 259
            |.|...     ||...::.:.|.|.|  ...||.......|..:.|      |||         :
  Rat   155 RPYDTN-----LTLTSQYMLQVDASGWYQLLLGPEAQAACSQGHLT------LEL---------V 199

  Fly   260 VKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSK 324
            .:|:..|...|             ||  |:.||       ||:....|        ....|    
  Rat   200 PESQLAHSSLI-------------LD--GVSHR-------PFVAAQVR--------VEGKH---- 230

  Fly   325 RSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNF 389
                  |.|::.::...:        :|.|..|..::||:::|||||||.||||...:|:|:|  
  Rat   231 ------RVRRRGINCQGL--------SRMCCRQEFFVDFREIGWHDWIIQPEGYAMNFCTGQC-- 279

  Fly   390 PLNA----HMNATNHAIVQTLVHLLEPKKVPK--PCCAPTRLGALPVLYHLNDENVNLKKYRNMI 448
            ||:.    .::|:.|..|..|:.........:  .||.||....|.:||:..|.|:......:|:
  Rat   280 PLHVAGMPGISASFHTAVLNLLKANTDAGTARRGSCCVPTSRRPLSLLYYDRDSNIVKTDIPDMV 344

  Fly   449 VKSCGC 454
            |::|||
  Rat   345 VEACGC 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 55/239 (23%)
TGFB 354..455 CDD:214556 38/107 (36%)
InhbcNP_072136.1 TGF_beta_INHBC_E 246..351 CDD:381676 38/107 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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