DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gbb and Bmp15

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_067702.1 Gene:Bmp15 / 59302 RGDID:70990 Length:391 Species:Rattus norvegicus


Alignment Length:427 Identity:99/427 - (23%)
Similarity:152/427 - (35%) Gaps:117/427 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 IAERPTHLSSHQLSLRKSAP-------------KFLLDVYHRITAEEGLSDQDEDDDYERGHRSR 125
            :||.||..||  |.|.|.||             :::|.:|                        :
  Rat    35 LAENPTLPSS--LDLAKEAPGKEMKQWPQGYPLRYMLKLY------------------------Q 73

  Fly   126 RSADLEEDEGEQQKN-FITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDVSNVPNDN 189
            ||||   ..|..::| .|.....|.|..|...|..|....|.         :.|.|.:::.....
  Rat    74 RSAD---PHGHPRENRTIGAKMVRLIKPSASAMRLLRGPWHI---------QTLDFPLASNEVAY 126

  Fly   190 YLVMAELRIYQ----------NANEGKWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYV 244
            .|:.|.: :|:          :.:...|:...|.              :|......|...:....
  Rat   127 QLIRATV-VYRHQLHLVHYHLSCHVEPWVPKCRT--------------KHFPSKSGSAKPSSVSK 176

  Fly   245 GWLELNVTEGLHE--WLVK-------------SKDNHGIYIGAHAVNRPDREVKL---DDIGLIH 291
            .|.|:|:|..:.:  |..|             .|.|..:.:..|.:...|....|   ||     
  Rat   177 AWREMNITHCIQQKLWNRKGRRVLRLRFMCQQQKGNETLELRWHGMTSLDVAFLLLYFDD----- 236

  Fly   292 RKVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRS--- 353
              .|:..|..::.  ||.|.:.........||.|...       |:: ::|| ....|..||   
  Rat   237 --TDESAQAKLLA--RGQEELTDRESPFLMRSVRQTC-------SIA-SDVP-CPSQEQDRSVNN 288

  Fly   354 -CQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPK 417
             |.:....:.|..|||..|||||..|...||.|.|...|...:|:.||||:|:||:.|..:.||:
  Rat   289 QCSLHPYKVSFHQLGWDHWIIAPRLYTPNYCKGICTGVLPYGLNSPNHAIIQSLVNELVNRSVPQ 353

  Fly   418 PCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            ..|.|.:...:.:|....:.::..|:|..||.:||.|
  Rat   354 LSCVPYKFLPMSILLIEANGSILYKEYEGMIAQSCTC 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 50/272 (18%)
TGFB 354..455 CDD:214556 37/101 (37%)
Bmp15NP_067702.1 TGF_beta 288..390 CDD:278448 36/101 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.