DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gbb and inha

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001038669.1 Gene:inha / 570520 ZFINID:ZDB-GENE-060503-554 Length:347 Species:Danio rerio


Alignment Length:449 Identity:94/449 - (20%)
Similarity:147/449 - (32%) Gaps:134/449 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLMFVATTPPAVEATQSGIYIDNGKDQTIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLS 87
            |:::...:||:|:|.|.        |:.....||..     :...|||.||:.|.|  |...||.
Zfish    15 LMLWALFSPPSVQACQG--------DELPCDMVLGW-----LKRRILEGLGLDEPP--LPVLQLP 64

  Fly    88 LRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRS------------ADLEEDEGEQQKN 140
            .|::..:.:..|..|:|.|..:         ||.|....|            .|:.....:....
Zfish    65 TRQAGNRAVHHVASRMTRETRV---------ERRHHQESSQVILFPSSESTCKDIPGHSSDAGPG 120

  Fly   141 FITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDV-SNVPNDNYLVMAELRIYQNANE 204
            ..|...:.::|..:.|:|                ....||.. ..:.:.|  :.|.|.|      
Zfish   121 HFTYYFQPSLDSQESIIT----------------SAHFWFYAGETIASIN--ISAPLFI------ 161

  Fly   205 GKWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIY 269
               ||.|:|.               .....|.|..:.|  ||....:...||..:...:  ..:.
Zfish   162 ---LTHNKEL---------------LKASESPVKRSPD--GWTTYKLDVHLHTPMADGQ--FMLQ 204

  Fly   270 IGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRK 334
            |.....:..|.|.|.                        |.|...|..|...||:|:...|    
Zfish   205 IRCPTCSCHDSEDKT------------------------PFLHLHTRSSGPDRSRRAPKIP---- 241

  Fly   335 KSVSPNNVP-LLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNAT 398
              .||:.:. |..|......|:.:.:.|.|:||||::||:.|:.:..:||.|.|:   :|....|
Zfish   242 --WSPDAIENLKRPASQGTDCRREQIEISFEDLGWNNWIVHPKSFTFYYCHGNCS---SAERITT 301

  Fly   399 NHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYR---NMIVKSCGC 454
            ...|.|              ||||.......:.:....:.....||.   |:|.:.|.|
Zfish   302 ILGITQ--------------CCAPVPESMKSLRFTTTSDGGYSFKYETLPNIIPEECNC 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 48/272 (18%)
TGF_beta_BMP5_like 353..455 CDD:381639 28/105 (27%)
inhaNP_001038669.1 TGF_beta_INHA 259..347 CDD:381632 28/105 (27%)

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