DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and bmp8a

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001038436.1 Gene:bmp8a / 561963 ZFINID:ZDB-GENE-030912-13 Length:433 Species:Danio rerio


Alignment Length:445 Identity:148/445 - (33%)
Similarity:214/445 - (48%) Gaps:88/445 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GKDQTIMH---RVLSEDDKLDVSYEILEFLGIAERPTHLSSH-QLSLRKSAPKFLLDVYHRITAE 106
            |:.:.::|   |.||..:|.::..|||..||:..||   ..| .|....|||.|:||:||.:::|
Zfish    40 GQVEGVVHSSFRRLSGREKKEMQKEILSILGLPGRP---RPHPPLRPPSSAPLFMLDLYHAVSSE 101

  Fly   107 EGLSDQDEDDDYERGHRSRRSADLEEDEGEQQKNFITDLDKRA---------------IDESDII 156
                   .||....|                   |..::...|               :.|:|.:
Zfish   102 -------ADDRPGLG-------------------FTPEVVSHAALPTLSTHMPPLGTVVSEADTV 140

  Fly   157 MTFLNKRHHNVDELRHEHGRRLW----FDVSNVPNDNYLVMAELRIYQNANEGKWLTANREFTIT 217
            |:|:|......|.|:   .|..|    ||::.:|....:..||.|||:....| | ..|....|:
Zfish   141 MSFVNLVEQEKDLLQ---PRPYWKEFRFDLTPLPQGETVTAAEFRIYKTLTMG-W-RFNHTLHIS 200

  Fly   218 VYAIGTGTLGQHTMEP----LSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGI--YIGAHAVN 276
            ||.|   ...:...||    |...:......|||..:||...:.||:..:.|.||  |:.....:
Zfish   201 VYEI---LREKRHREPELVLLDMQSVPAGQEGWLAFDVTSASNRWLLHPRSNLGIRLYVETEEDH 262

  Fly   277 RPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRKKSVS--- 338
            |       ..:||:.|:.....||||:.|||        |..:..|..|:..|..:|||...   
Zfish   263 R-------SWVGLVGRRGPRSKQPFMVTFFR--------ASQAPCRPPRALKHTNQRKKKTKYDL 312

  Fly   339 --PNNVPLLEPMEST--RSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATN 399
              ||...:.:...|:  ::|:...||:.|.||||.||::||.||.|:||.|||::||.:.|||||
Zfish   313 PHPNRPGIFDQNHSSGRQACKKHELYVSFSDLGWKDWVLAPTGYSAYYCDGECDYPLGSCMNATN 377

  Fly   400 HAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            ||::|.|||||.|.:|||.|||||:|..:.||::.::.||.|||.|||:||:|||
Zfish   378 HAMIQLLVHLLRPDEVPKACCAPTKLSPIAVLFYDDNNNVILKKQRNMVVKNCGC 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 75/287 (26%)
TGFB 354..455 CDD:214556 60/101 (59%)
bmp8aNP_001038436.1 TGFb_propeptide 46..284 CDD:279078 74/281 (26%)
TGFB 332..432 CDD:214556 58/99 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 172 1.000 Domainoid score I3669
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 256 1.000 Inparanoid score I3143
OMA 1 1.010 - - QHG47130
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 1 1.000 - - otm25252
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.940

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