DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gbb and inhbab

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001018166.1 Gene:inhbab / 553816 ZFINID:ZDB-GENE-050525-2 Length:405 Species:Danio rerio


Alignment Length:423 Identity:100/423 - (23%)
Similarity:153/423 - (36%) Gaps:109/423 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 IAERPTHLSSHQLSLRKSAPKFLLDVYHRIT-------------------------AEEGLSDQD 113
            :|:||.. |..|..:.::..:.:|::.|..|                         .|:|..:.:
Zfish    49 LAQRPKD-SEEQSDMVEAVKQHILNMLHLNTRPNVTHPVPRAALLNAIRKPHVGRVGEDGTVEME 112

  Fly   114 EDDDYERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRL 178
            ||......||        |...||....||..:..  |..|::...::|....:..:...:   :
Zfish   113 EDGGGLGEHR--------EQPEEQPFEIITFAEPG--DAPDVLKFDISKEGSTLSVVEQAN---V 164

  Fly   179 WFDVSNVPNDNYLVMAELRIYQNANEGKWLTANRE-FTITVYAIGTGTLGQHTMEPLSSVNT--T 240
            |..:.............:::.||.......|...| ..::...|.|...|.||:....:|.|  .
Zfish   165 WLFLKVAKGSRVKGKVSVQLLQNGKADSGSTDRPEDQVVSEKTIDTRRSGWHTLPVPRTVQTLLD 229

  Fly   241 GDYVGWLELNVT------EGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQ 299
            || ...|.|.|:      .|....||.::.|                 |:.:....||       
Zfish   230 GD-SSLLSLRVSCPMCAEAGAVPILVPAEGN-----------------KVKEREQSHR------- 269

  Fly   300 PFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFK 364
            ||::      .::|......|.||||.                  ||.....|.|..:..|::||
Zfish   270 PFLM------VVLKPAEEHQHRRSKRG------------------LECDGKIRVCCKRQFYVNFK 310

  Fly   365 DLGWHDWIIAPEGYGAFYCSGEC--------NFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCA 421
            |:||.||||||.||.|.||.|:|        ...|:.|....||..::.    ..|....|.||.
Zfish   311 DIGWSDWIIAPSGYHANYCEGDCPSHVASITGSALSFHSTVINHYRMRG----YSPFNNIKSCCV 371

  Fly   422 PTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            ||||.|:.:||:..::.:..|..:||||..|||
Zfish   372 PTRLRAMSMLYYNEEQKIIKKDIQNMIVDECGC 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 48/264 (18%)
TGF_beta_BMP5_like 353..455 CDD:381639 43/110 (39%)
inhbabNP_001018166.1 TGF_beta_INHBA 298..405 CDD:381674 44/111 (40%)

Return to query results.
Submit another query.