DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and bmp2

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001015963.1 Gene:bmp2 / 548717 XenbaseID:XB-GENE-481829 Length:398 Species:Xenopus tropicalis


Alignment Length:449 Identity:132/449 - (29%)
Similarity:208/449 - (46%) Gaps:120/449 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 YIDNGK-----DQTIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYH 101
            |.::|:     .|:::::         ....:|...|:..|||...:..:      |.::||:||
 Frog    33 YTESGRSSPQHSQSVLNQ---------FELRLLNMFGLKRRPTPGKNIVI------PPYMLDLYH 82

  Fly   102 RITAEEGLSDQDEDD-DYERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHH 165
             :.:.:..:|||... ||:                          .:||...::.:.:|    ||
 Frog    83 -LHSGQLAADQDSSPMDYQ--------------------------IERAASRANTVRSF----HH 116

  Fly   166 --NVDELRHEHG----RRLWFDVSNVPNDNYLVMAELRIY----QNANEGKWLTANREFTITVYA 220
              :::|: .|.|    :|.:|::|:|||:..:..|||||:    |...||   .:::...|.:|.
 Frog   117 EESMEEI-PESGEKTIQRFFFNLSSVPNEELVTSAELRIFREGVQEPFEG---DSSKLHRINIYD 177

  Fly   221 IGTGTLGQHTMEPLSSVNTTGDYV-------------GWLELNVTEGLHEWLVKSKDNHGIYIG- 271
            |         ::|.::. :.|..|             .|...:||..:..|:...:.|||..:. 
 Frog   178 I---------VKPAAAA-SRGPVVRLLDTRLIHHNESKWESFDVTPAITRWIAHKQPNHGFVVEV 232

  Fly   272 AHAVNRPDREVKLDDIGLIHRKVDDE-----FQPFMIGFFRGPELIKATAHSSHHRSKRSASH-P 330
            .|..|  |:.|....:.:....|.|:     .:|.::.|..     ....|:.|.|.||.|.| .
 Frog   233 THLDN--DKNVPKKHVRISRSLVPDKDSWPRIRPLLVTFSH-----DGKGHALHKREKRQARHKQ 290

  Fly   331 RKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHM 395
            |||.||                ||:...||:||.|:||:|||:||.||.||||.|||.|||..|:
 Frog   291 RKRLKS----------------SCRRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHL 339

  Fly   396 NATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            |:||||||||||:.:.| .:||.||.||.|.|:.:||...:|.|.||.|::|:|:.|||
 Frog   340 NSTNHAIVQTLVNNVNP-NIPKACCVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGC 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 59/295 (20%)
TGFB 354..455 CDD:214556 58/101 (57%)
bmp2NP_001015963.1 TGFb_propeptide 34..269 CDD:366248 59/296 (20%)
TGF_beta_BMP2_like 298..398 CDD:381638 58/101 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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