DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and bmp6

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001013357.1 Gene:bmp6 / 503761 ZFINID:ZDB-GENE-050306-42 Length:417 Species:Danio rerio


Alignment Length:414 Identity:149/414 - (35%)
Similarity:229/414 - (55%) Gaps:40/414 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 MHRVLSEDDKLDVSYEILEFLGIAERP-THLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDED 115
            :||.|...:|.::..|||..||:..|| .||:|.:.:   |||.|:||:|:.::.||    :.:.
Zfish    34 IHRRLRSQEKREMQKEILSILGLNHRPRPHLNSGKYN---SAPLFMLDLYNSMSTEE----KSDV 91

  Fly   116 DDYERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHHNVD-ELRHEHGRRLW 179
            |.|.....:.|.|            ..:..|...:.::|::|:|:|...::.: .|:..|.:...
Zfish    92 DQYRSLFTTTRPA------------LASHHDTEFLHDADMVMSFVNLVENDRELSLQRRHHKEFK 144

  Fly   180 FDVSNVPNDNYLVMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQH-----TMEPLSSVNT 239
            |::|.:|....:..||.|||:......:  .|..|.::|:.:    :|:|     .:..|.|...
Zfish   145 FNLSQIPEGEAITAAEFRIYKECVTSAF--RNETFLLSVFQV----VGEHPDRDADLFLLESRRL 203

  Fly   240 TGDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIG 304
            .|...||||.::|...:.|::....|.|:.|.....:  .|.:...|.||:.|....|.||||:.
Zfish   204 WGAEQGWLEFDITATSNLWVMSPHHNLGLQISVETSS--GRSISPKDAGLVGRDGALERQPFMVA 266

  Fly   305 FFRGPELIKATAHSS---HHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDL 366
            ||:..|:...|:.|:   ..|::..::.|::..|..:..:   ....:...:|:...||:.|::|
Zfish   267 F
FKVSEVRIRTSRSTGKQRQRNRNRSNSPQEASKGPAHTD---YNSSDQKTACRKHDLYVSFREL 328

  Fly   367 GWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVL 431
            .|.|||||||||.|.||.|||:|||||||||||||||||||||:.|:.|||||||||:|.|:.||
Zfish   329 SWQDWIIAPEGYAANYCDGECSFPLNAHMNATNHAIVQTLVHLMNPENVPKPCCAPTKLHAISVL 393

  Fly   432 YHLNDENVNLKKYRNMIVKSCGCH 455
            |:.::.||.|||||||:|:|||||
Zfish   394 YYDDNSNVILKKYRNMVVRSCGCH 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 69/259 (27%)
TGFB 354..455 CDD:214556 70/100 (70%)
bmp6NP_001013357.1 TGFb_propeptide 28..267 CDD:279078 69/259 (27%)
TGFB 316..417 CDD:214556 70/100 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 172 1.000 Domainoid score I3669
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 256 1.000 Inparanoid score I3143
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 1 1.000 - - otm25252
orthoMCL 1 0.900 - - OOG6_107058
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4460
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.860

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