DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and bmp5

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_957345.1 Gene:bmp5 / 394026 ZFINID:ZDB-GENE-040426-1413 Length:446 Species:Danio rerio


Alignment Length:451 Identity:156/451 - (34%)
Similarity:228/451 - (50%) Gaps:66/451 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DNGKDQTIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEE- 107
            ||....:.::|.|...::.::..|||..||:..||...|..:.:  .|||.|:||:|:.:|.|| 
Zfish    23 DNHVHSSFIYRRLRNHERREIQREILSILGLPHRPRPFSPGKQA--SSAPLFMLDLYNAMTTEEE 85

  Fly   108 ------------GLSDQDEDDDYERG------HRSRRSADLEEDE----GEQQKNFITDLDKRAI 150
                        ..|.......|.|.      .:..|:|.|....    .....||:.|      
Zfish    86 NAILGKSLAGKVRKSAPGAPHGYSRAPPRVPQPQHSRAAPLSSQSPPLANAHDTNFLND------ 144

  Fly   151 DESDIIMTFLNKRHHNVDELRH-EHGRRLWFDVSNVPNDNYLVMAELRIYQNANEGKWLTANREF 214
              :|::|:|:|....:.|...| .|.|...||::.:|....:..||.|||::.:..::  .|...
Zfish   145 --ADMVMSFVNLVERDKDFSHHRRHYREFRFDLTQIPEGEAVTAAEFRIYKDQSHIRY--ENITL 205

  Fly   215 TITVYAI---------GTGTLGQHTMEPLSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYI 270
            .:|:|.:         .|..|....:..     |.|   |||..::|...:.|::..:.|.|:.:
Zfish   206 KVTIYQVIKEYPNRDPDTFLLDWKKIRA-----TDG---GWLVFDITATSNHWVLNPQQNMGLQL 262

  Fly   271 GAHAVNRPD-REVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRK 334
               .|...| |.:.:...|:|.|......|||::.||:..|::..:..::..:.|   ||.|.:.
Zfish   263 ---CVETTDGRSINMKSAGIIGRNGPQSKQPFLVAFFKASEVLLRSVRATGSKKK---SHNRNKS 321

  Fly   335 KSVSPNNVPLLE-----PMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAH 394
            |: ...:.|.|:     ..|..::|:...||:.|:||||.|||||||||.||||.|||:||||||
Zfish   322 KT-QVKSTPALKSGDQNTSEQRQACKKHELYVSFRDLGWQDWIIAPEGYAAFYCDGECSFPLNAH 385

  Fly   395 MNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGCH 455
            |||||||||||||||:.|..|||||||||:|.|:.|||..:..||.|||||||:|:|||||
Zfish   386 MNATNHAIVQTLVHLMFPDNVPKPCCAPTKLNAISVLYFDDSSNVILKKYRNMVVRSCGCH 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 70/294 (24%)
TGFB 354..455 CDD:214556 73/100 (73%)
bmp5NP_957345.1 TGFb_propeptide 23..295 CDD:279078 70/294 (24%)
TGF_beta 343..445 CDD:278448 72/101 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 172 1.000 Domainoid score I3669
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 256 1.000 Inparanoid score I3143
OMA 1 1.010 - - QHG47130
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 1 1.000 - - FOG0000576
OrthoInspector 1 1.000 - - otm25252
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1111.080

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