DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and tgfb2

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_919366.1 Gene:tgfb2 / 369194 ZFINID:ZDB-GENE-030723-3 Length:411 Species:Danio rerio


Alignment Length:476 Identity:118/476 - (24%)
Similarity:196/476 - (41%) Gaps:111/476 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LGMVLLMFVATTPPAVEATQSGIYIDNGKD---QTIMHRVLSEDDKLDVSYEILEFLGIAERPTH 80
            |.::||:.:|....:: :|.|.:.:|..|.   :.|..::||: .||....||.      ..|..
Zfish     6 LSLLLLLDLAAVAVSL-STCSTVDMDQFKKKRIEAIRGQILSK-LKLSSPPEIY------PEPEE 62

  Fly    81 LSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSADLEEDEGEQQKNFITDL 145
            :|...:::..|....|                     .|:.:....:.:.:..|.|.....:..:
Zfish    63 VSRGIIAIYNSTRDLL---------------------QEKANERAATCERQRSEEEYYAKEVHKI 106

  Fly   146 DKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDVSNV-PNDNYLVMAELRIYQNANEGKWLT 209
            |.:....|:.::.   .:|:      :.:.|||.||||:: .|.:.||.|:|||::..|....:.
Zfish   107 DMQPFYPSENVIL---SQHY------YPYFRRLMFDVSSMEKNASNLVKAQLRIFRLQNPKARVF 162

  Fly   210 ANREFTITVY-AIGTGTLGQHTMEPLSS----VNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIY 269
            ..|   |.:| .:|...|...|...::|    ..|.|:   ||..:|||.:.|||:....|.|..
Zfish   163 EQR---IELYQVLGHKDLTSPTQRYINSKVVRTRTEGE---WLSFDVTEAVSEWLLHRDRNKGFK 221

  Fly   270 IGAHA------------VNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPEL--IKATAHS-- 318
            |..|.            :.....|::....|     :||       .|..|.:|  .|...||  
Zfish   222 ISLHCPCCTFVPSNNYIIPNKSEELETRFAG-----IDD-------SFVNGGDLKMFKKRRHSGQ 274

  Fly   319 ----------SHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQ----MQTLYIDF-KDLGW 368
                      |:....:..||.:||          .|:....:|:.|    :::||||| |||||
Zfish   275 SPHLLLMLLPSYRLESQHKSHRQKR----------ALDTAFCSRNVQDNRCLRSLYIDFKKDLGW 329

  Fly   369 HDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYH 433
            . ||..|:||.|.:|:|.|.:..:|.   |.|:.:..|.:.:.|:....|||....|..|.:||:
Zfish   330 R-WIHEPKGYNANFCAGACPYLWSAD---TQHSNILGLYNTINPEASASPCCVSQDLEPLTILYY 390

  Fly   434 LNDENVNLKKYRNMIVKSCGC 454
            :. :...:::..|||||||.|
Zfish   391 IG-KTPKIEQLSNMIVKSCKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 58/280 (21%)
TGF_beta_BMP5_like 353..455 CDD:381639 40/107 (37%)
tgfb2NP_919366.1 TGFb_propeptide 21..228 CDD:480997 57/250 (23%)
TGF_beta_TGFB2 314..410 CDD:381655 38/100 (38%)

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