DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and daw

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster


Alignment Length:404 Identity:85/404 - (21%)
Similarity:166/404 - (41%) Gaps:86/404 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSA 128
            |..:|||.|.:.|.| .:|:.:|      ||.:.|.......::...:::.||.|.|..:.....
  Fly   255 VKQQILEKLRLKESP-KVSAVEL------PKPIFDGMTLSHPDDSTKNKELDDYYARTSKKFILL 312

  Fly   129 DLEEDE------GEQQKNF-----ITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDV 182
            :.||.|      |:...:.     |.|.|....|.|..::.....:.:..|..          .|
  Fly   313 NREEVECNRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLWLFKNKQNRTDTA----------SV 367

  Fly   183 SNVPNDNYLVMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYVGWL 247
            ::......:|::|:.:.|. .:.|:|:|.:...|                  .|||...:   |:
  Fly   368 NSTSAQQTIVVSEVEVDQQ-KDSKYLSAAKTIAI------------------QSVNVQDE---WM 410

  Fly   248 ELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELI 312
            ::::...:..|:...:.:|.|.|.....:..|.|..:        .||.:::||::         
  Fly   411 KIDIEWPIKHWISGHELSHLIQITCGGCDVSDMEEII--------SVDKDYRPFIV--------- 458

  Fly   313 KATAHSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEG 377
                ....:|.::|     ::|:|::.::        ....|..:.|||.|:|:||.:||:.|||
  Fly   459 ----IDMQNRRRKS-----RQKRSINCSS--------GMTECCREHLYISFRDIGWSNWILKPEG 506

  Fly   378 YGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPK--PCCAPTRLGALPVLYHLNDENVN 440
            |.|::|.|.|:...:....|::|:.:..::......|..:  |||...:..:|.::...:.....
  Fly   507 YNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTAT 571

  Fly   441 LKKYRNMIVKSCGC 454
            :|...||:|:||||
  Fly   572 VKTLPNMVVESCGC 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 48/251 (19%)
TGFB 354..455 CDD:214556 33/103 (32%)
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 48/249 (19%)
TGF_beta 481..585 CDD:278448 31/103 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466518
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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