DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and dpp

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster


Alignment Length:462 Identity:132/462 - (28%)
Similarity:198/462 - (42%) Gaps:115/462 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 AERPTHLSSHQLSLRKSAPKFLLD----------VYHRITAEEG---------LSDQDEDD---- 116
            |...:|.||...|:....|..:||          ....|.||:|         :.|:.:.|    
  Fly   159 ASTESHQSSSIESIFVEEPTLVLDREVASINVPANAKAIIAEQGPSTYSKEALIKDKLKPDPSTL 223

  Fly   117 -DYERGHRS----RRSADLEEDE---GEQQKNFITDLDKRAIDESDI------------IMTFLN 161
             :.|:...|    :|...::..:   .|..|....::....:|..:|            :.:|.:
  Fly   224 VEIEKSLLSLFNMKRPPKIDRSKIIIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTH 288

  Fly   162 KRHHNVDELRHEHGRRLWFDVSNVPNDNYLVMAELRIYQNANEGKWL----TANR-EFTITVYAI 221
            |.....|...|.|..||.|||.::|.|..|..|||::.::|...:.:    :||| .:.:.||.|
  Fly   289 KDSKIDDRFPHHHRFRLHFDVKSIPADEKLKAAELQLTRDALSQQVVASRSSANRTRYQVLVYDI 353

  Fly   222 -GTGTLGQHTMEP-----------LSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAHA 274
             ..|..||.  ||           |:|.:|       :.|:|...:..||...:.|:|:.:....
  Fly   354 TRVGVRGQR--EPSYLLLDTKTVRLNSTDT-------VSLDVQPAVDRWLASPQRNYGLLVEVRT 409

  Fly   275 VN----RPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHH-------------- 321
            |.    .|...|:|      .|..|:..:.:.   .:.|.|...|....|.              
  Fly   410 VRSLKPAPHHHVRL------RRSADEAHERWQ---HKQPLLFTYTDDGRHKARSIRDVSGGEGGG 465

  Fly   322 ---RSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYC 383
               |:||....|.:||              ....:|:..:||:||.|:||.|||:||.||.|:||
  Fly   466 KGGRNKRQPRRPTRRK--------------NHDDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYC 516

  Fly   384 SGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDEN-VNLKKYRNM 447
            .|:|.|||..|.|:||||:|||||:.:.|.||||.||.||:|.::.:|| |||:: |.||.|:.|
  Fly   517 HGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLY-LNDQSTVVLKNYQEM 580

  Fly   448 IVKSCGC 454
            .|..|||
  Fly   581 TVVGCGC 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 64/293 (22%)
TGFB 354..455 CDD:214556 58/102 (57%)
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 52/236 (22%)
TGFB 487..588 CDD:214556 58/102 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466524
Domainoid 1 1.000 126 1.000 Domainoid score I3358
eggNOG 1 0.900 - - E1_KOG3900
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1063560at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14749
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X157
87.850

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