DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and bmp15

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001018320.1 Gene:bmp15 / 334183 ZFINID:ZDB-GENE-030131-6115 Length:384 Species:Danio rerio


Alignment Length:416 Identity:110/416 - (26%)
Similarity:161/416 - (38%) Gaps:104/416 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRS--RRSADLEEDEG 135
            |:|....|.:.|.   ::..|.|...|..|           .|||..|...|  |.:|| .:...
Zfish    38 GVASTEVHRNRHP---KRRNPHFRPPVESR-----------TDDDGMRLMLSLYRIAAD-ADGRP 87

  Fly   136 EQQK----NFITDLDKRAIDE------SDIIMTFLNKRHHN---VDE--------LRHEHGRRLW 179
            :|.|    |.|..|.....::      ||:..|:..|...|   :|:        ||.....|| 
Zfish    88 KQHKIFGSNTIRLLQASTTEKHFPPTSSDLQYTYTVKYELNDLLLDKLVKASFMYLRSPMSSRL- 151

  Fly   180 FDVSNVPNDNYLVMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYV 244
                     .|:..|.:...||..||..:                     ||.|.|.        
Zfish   152 ---------PYICEASVTSLQNPLEGDRI---------------------TMGPRSR-------- 178

  Fly   245 GWLELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGP 309
             |.|.:||:.:.|    |||.|..:...:...:|:.:     ..:.|||   .|.|  ....|.|
Zfish   179 -WTETDVTDHVSE----SKDGHVSFFARYWCTKPEHK-----RSVAHRK---RFPP--QHHLRAP 228

  Fly   310 ELIKATAHSSH----HRSKRSASHPRKR--KKSVS-----PNNVPLLEPMESTRSCQMQTLYIDF 363
            .|:.....:.|    .:|....|.||.|  |||.|     ||....|..: :..:|::.:..:||
Zfish   229 LLLLFLEENKHPVEWGKSFPPLSRPRTRRSKKSGSIVSDIPNFKQGLNRV-TKNNCKLYSSSVDF 292

  Fly   364 KDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGAL 428
            |||||..|:|||..|...||.|:|...|:...|:.||||:||.:..|....:|.|.|.|.:...:
Zfish   293 KDLGWDHWVIAPHKYNPGYCMGDCPRILHYGYNSPNHAIMQTFISELGVADIPLPSCVPYKYKRM 357

  Fly   429 PVLYHLNDENVNLKKYRNMIVKSCGC 454
            .:|...::..::.|:|.:||..||.|
Zfish   358 SMLVMGSNGQIDYKEYEDMIADSCTC 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 56/254 (22%)
TGFB 354..455 CDD:214556 38/101 (38%)
bmp15NP_001018320.1 TGF_beta 281..383 CDD:278448 37/101 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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