DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and gdf7

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_694563.2 Gene:gdf7 / 30642 ZFINID:ZDB-GENE-990714-1 Length:422 Species:Danio rerio


Alignment Length:415 Identity:109/415 - (26%)
Similarity:185/415 - (44%) Gaps:81/415 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 THLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSA-------DLEEDEG- 135
            |..||...|.....|.:::.:|..      ||:.|.........||||.|       ||.:||. 
Zfish    49 TSASSRNESTSVHVPSYMISLYRT------LSELDRRTGNGSHTRSRRYANTVTSFMDLGQDEPS 107

  Fly   136 ---EQQKNF-ITDLDKRAIDE-SDIIMTFLNKRHHNVDELRHEHGR--RLWFDVSNVPNDNYLVM 193
               :||..| ::.|.:  :|| .::.:..|.:...:|..|....|.  ||.....::|...:..:
Zfish   108 LMFQQQYTFNLSGLSR--LDELMEVELRVLRRPPQDVLSLLSYGGNLYRLLLHTCSLPGSLHQPL 170

  Fly   194 AELRIYQNANEGKWLTANREFTITVYAIGTGT-----LGQHTMEPLSSVNTTGDYVGWLELNVTE 253
                          |.::|  ||.:....:.|     :|.....||....|..| ...|.|::: 
Zfish   171 --------------LLSSR--TIDLLDTSSATWDVFDVGPIIKTPLKQHRTAED-TRLLCLSIS- 217

  Fly   254 GLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGL----------IHRKVDDEFQPFMIGFFRG 308
                 .|...:|..::.|...::|.|::.....:.:          :.|::.::.:......|..
Zfish   218 -----AVSDSNNEAVHPGMLGLSREDQQTHERALLVAFSQARRKENLFREIREKIRAMKSRKFSN 277

  Fly   309 PELIKATAHSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMES---------TRSCQMQTLYIDFK 364
            |        :..|..|....|.|:|:.:::..  |.:.|:.|         || |..:.|:::||
Zfish   278 P--------TPEHSIKGHPRHRRRRRTALAGR--PGVGPITSGGKGGGRRRTR-CSRKPLHVNFK 331

  Fly   365 DLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALP 429
            :|||.||||||..|.|::|.|.|:|||.:|:..|||||:|||::.::|:..|..||.|::|..:.
Zfish   332 ELGWDDWIIAPLDYEAYHCEGLCDFPLRSHLEPTNHAIIQTLMNSMDPESTPPSCCVPSKLSPIS 396

  Fly   430 VLYHLNDENVNLKKYRNMIVKSCGC 454
            :||..:..||..|:|.:|:|:||||
Zfish   397 ILYIDSGNNVVYKQYEDMVVESCGC 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 49/255 (19%)
TGFB 354..455 CDD:214556 48/101 (48%)
gdf7XP_694563.2 TGFb_propeptide 62..250 CDD:279078 44/218 (20%)
TGFB 324..422 CDD:214556 47/98 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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