DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and bmp4

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_571417.2 Gene:bmp4 / 30612 ZFINID:ZDB-GENE-980528-2059 Length:400 Species:Danio rerio


Alignment Length:455 Identity:127/455 - (27%)
Similarity:203/455 - (44%) Gaps:110/455 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 EATQSGIYIDNGKDQ-TIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLD 98
            |::.:.:..:.||.: :.:|...|.:...|....:|...|:..||.  .||...:    |::|||
Zfish    20 ESSYASLIPEEGKKKASALHLAQSHELLRDFEATLLHMFGLQRRPR--PSHSAVV----PQYLLD 78

  Fly    99 VYHRITAEEGLSDQDEDDDYERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKR 163
            :|.                       .:|.:||| .|.|..:|  |..:|:...::.:..|.::.
Zfish    79 LYR-----------------------LQSGELEE-AGAQHVSF--DYPERSTSRANTVRGFHHEE 117

  Fly   164 HHNVDELRHEHGR----RLWFDVSNVPNDNYLVMAELRIY------------QNANEG------- 205
            |  ::||:.:..:    |..|::|::|.|..:..||||||            |..:.|       
Zfish   118 H--LEELQSDGSQETPLRFVFNLSSIPEDELISTAELRIYRQQIDDAFSDPDQTGDHGLHRINIY 180

  Fly   206 KWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYI 270
            :.|.|.||..:....:.|..:..:|.:             |...:|:..:..|..:.:.|||:.:
Zfish   181 EVLKAPREGQLITQLLDTRLVRHNTSK-------------WESFDVSPAVLRWTQEKRSNHGLAV 232

  Fly   271 GAHAVNR----PDREVKLDDIGLIHRKVD-------DEFQPFMIGFFRGPELIKATAHSSHHRSK 324
            ....:.|    ..|.|:      :.|.|.       |:.:|.::.|              .|..|
Zfish   233 EVVQMKRNPVQKGRHVR------VSRSVHPLPNEEWDQLRPLLVTF--------------GHDGK 277

  Fly   325 RSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNF 389
               |||..|:...||..    ...:..|:|:...||:||.|:||:|||:||.||.|:||.|||.|
Zfish   278 ---SHPLTRRAKRSPKQ----RGRKRNRNCRRHALYVDFSDVGWNDWIVAPPGYQAYYCHGECPF 335

  Fly   390 PLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            ||..|:|:||||||||||:.:. ..:||.||.||.|.|:.:||....:.|.||.|:.|:|:.|||
Zfish   336 PLADHLNSTNHAIVQTLVNSVN-TNIPKACCVPTELSAISMLYLDETDRVVLKNYQEMVVEGCGC 399

  Fly   455  454
            Zfish   400  399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 61/294 (21%)
TGF_beta_BMP5_like 353..455 CDD:381639 55/102 (54%)
bmp4NP_571417.2 None

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