DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Bmp2

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_058874.2 Gene:Bmp2 / 29373 RGDID:2211 Length:394 Species:Rattus norvegicus


Alignment Length:429 Identity:133/429 - (31%)
Similarity:198/429 - (46%) Gaps:111/429 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SEDDKLDVSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERG 121
            |:|...:....:|...|:.:|||.      |.....|.::||:|.|.:.:.|....|        
  Rat    45 SDDVLSEFELRLLSMFGLKQRPTP------SKDVVVPPYMLDLYRRHSGQPGAPAPD-------- 95

  Fly   122 HRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHHN--VDELRHEHG---RRLWFD 181
            ||..|:|                      ..::.:.:|    ||.  ::||....|   ||.:|:
  Rat    96 HRLERAA----------------------SRANTVRSF----HHEEAIEELPEMSGKTSRRFFFN 134

  Fly   182 VSNVPNDNYLVMAELRIYQNANEG-----------------KWLTANREFTITVYAIGTGTLGQH 229
            :|:||.|.:|..|||:|::...:.                 |..||:.:|.:| ..:.|..:.|:
  Rat   135 LSSVPTDEFLTSAELQIFREQMQEALGNSSFQHRINIYEIIKPATASSKFPVT-RLLDTRLVTQN 198

  Fly   230 TMEPLSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYIG-AHAVNRP---DREVKLDDIGLI 290
            |.:             |...:||..:..|..:...|||..:. ||...:|   .|.|::.  ..:
  Rat   199 TSQ-------------WESFDVTPAVMRWTAQGHTNHGFVVEVAHLEEKPGVSKRHVRIS--RSL 248

  Fly   291 HRKVDD----EFQPFMIGFFRGPELIKATAHSSHHRSKRSASH-PRKRKKSVSPNNVPLLEPMES 350
            |:  |:    :.:|.::.|  |.:   ...|..|.|.||.|.| .|||.||              
  Rat   249 HQ--DEHSWSQVRPLLVTF--GHD---GKGHPLHKREKRQAKHKQRKRLKS-------------- 292

  Fly   351 TRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKV 415
              ||:...||:||.|:||:|||:||.||.||||.|||.|||..|:|:||||||||||:.:. .|:
  Rat   293 --SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVN-SKI 354

  Fly   416 PKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            ||.||.||.|.|:.:||...:|.|.||.|::|:|:.|||
  Rat   355 PKACCVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGC 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 60/277 (22%)
TGFB 354..455 CDD:214556 58/101 (57%)
Bmp2NP_058874.2 TGFb_propeptide 41..265 CDD:395559 60/277 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..291 10/21 (48%)
TGF_beta_BMP2 292..394 CDD:381660 60/119 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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