DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Mstn

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_062024.1 Gene:Mstn / 29152 RGDID:3115 Length:376 Species:Rattus norvegicus


Alignment Length:396 Identity:101/396 - (25%)
Similarity:148/396 - (37%) Gaps:82/396 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VSYEILEFLGIAERPTHLSS---HQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSR 125
            :..:||..|.:...| ::|.   .||..|....:.|:|.|. :..::......|||||.....:.
  Rat    57 IKIQILSKLRLETAP-NISKDAIRQLLPRAPPLRELIDQYD-VQRDDSSDGSLEDDDYHATTETI 119

  Fly   126 RSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDVSNVPNDNY 190
            .:...|.|       |:...|.:   .......|.:|..:|     .....:||..:..|.....
  Rat   120 ITMPTESD-------FLMQADGK---PKCCFFKFSSKIQYN-----KVVKAQLWIYLRAVKTPTT 169

  Fly   191 LVMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYVGWLELNVTEGL 255
            :.:..||:.:...:|...|..|...:.: :.|||.                    |..::|...|
  Rat   170 VFVQILRLIKPMKDGTRYTGIRSLKLDM-SPGTGI--------------------WQSIDVKTVL 213

  Fly   256 HEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSH 320
            ..||.:.:.|.||.|.|...|..|..|.....|      :|...||:        .:|.|  .:.
  Rat   214 QNWLKQPESNLGIEIKALDENGHDLAVTFPGPG------EDGLNPFL--------EVKVT--DTP 262

  Fly   321 HRSKRSASHPRKRKKSVSPNNVPLLEPME-STRS-CQMQTLYIDFKDLGWHDWIIAPEGYGAFYC 383
            .||:|...                |:..| ||.| |....|.:||:..|| ||||||:.|.|.||
  Rat   263 KRSRRDFG----------------LDCDEHSTESRCCRYPLTVDFEAFGW-DWIIAPKRYKANYC 310

  Fly   384 SGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMI 448
            ||||.|........|:      |||...|:....|||.||::..:.:||....|.:...|...|:
  Rat   311 SGECEFVFLQKYPHTH------LVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMV 369

  Fly   449 VKSCGC 454
            |..|||
  Rat   370 VDRCGC 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 51/243 (21%)
TGFB 354..455 CDD:214556 40/101 (40%)
MstnNP_062024.1 TGFb_propeptide 37..250 CDD:413528 49/236 (21%)
TGF_beta_GDF8 269..376 CDD:381658 45/130 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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