DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Inhbb

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_542949.1 Gene:Inhbb / 25196 RGDID:2913 Length:411 Species:Rattus norvegicus


Alignment Length:301 Identity:82/301 - (27%)
Similarity:128/301 - (42%) Gaps:75/301 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 RLWFDVSNVPNDN-YLVMAELRIYQN-----ANEGKWLTANREFTITVYAIGTGTLGQ-HTMEPL 234
            ||:|.|||..|.| ::|.|.|.:|..     ..:|    :.|:..:.||....|...: :.:|..
  Rat   162 RLYFFVSNEGNQNLFVVQASLWLYLKLLPYVLEKG----SRRKVRVKVYFQEQGHGDRWNVVEKK 222

  Fly   235 SSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLD-------DIGLIHR 292
            ..:..:    ||....:||.:..                ...|.:|.:.||       ::.::..
  Rat   223 VDLKRS----GWHTFPITEAIQA----------------LFERGERRLNLDVQCDSCQELAVVPV 267

  Fly   293 KVD---DEFQPFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSC 354
            .||   :..:||::        ::|....|.||.       |||.          ||....|..|
  Rat   268 FVDPGEESHRPFVV--------V
QARLGDSRHRI-------RKRG----------LECDGRTSLC 307

  Fly   355 QMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGEC-----NFPLNAHMNATNHAIV-QTLVHLLEPK 413
            ..|..:|||:.:||:||||||.||...||.|.|     ..|.:|  ::.:.|:| |..:..|.|.
  Rat   308 CRQQFFIDFRLIGWNDWIIAPTGYYGNYCEGSCPAYLAGVPGSA--SSFHTAVVNQYRMRGLNPG 370

  Fly   414 KVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            .| ..||.||:|.::.:||..::.|:..:...||||:.|||
  Rat   371 PV-NSCCIPTKLSSMSMLYFDDEYNIVKRDVPNMIVEECGC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 30/144 (21%)
TGF_beta_BMP5_like 353..455 CDD:381639 42/108 (39%)
InhbbNP_542949.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..69
TGFb_propeptide 73..282 CDD:480997 30/151 (20%)
TGF_beta_INHBB 305..411 CDD:381675 42/109 (39%)
Blue background indicates that the domain is not in the aligned region.

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