DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Inha

DIOPT Version :10

Sequence 1:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_036722.1 Gene:Inha / 24504 RGDID:2912 Length:366 Species:Rattus norvegicus


Alignment Length:187 Identity:52/187 - (27%)
Similarity:69/187 - (36%) Gaps:61/187 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 EFQPFMIGFFRGPELIKATAHSSHHRSKRSA-SHPRKRKKSVSPNNVPLLE-PMESTRS---CQM 356
            |..||::...|      |.|.|:..|::||| |.|    ...||..:.||: |.|...:   |..
  Rat   211 ETTPFLVAHTR------ARAPSAGERARRSAPSMP----WPWSPAALRLLQRPPEEPSAHAFCHR 265

  Fly   357 QTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVP----- 416
            ..|.|.|::|||..||:.|..:...||.|.|..|.:.                 .|..||     
  Rat   266 AALNISFQELGWDRWIVHPPSFIFHYCHGSCGMPTSD-----------------LPLPVPGAPPT 313

  Fly   417 -----------KPCCA--PTRLGALPVL------YHLNDENVNLKKYRNMIVKSCGC 454
                       |||||  |..:.:|.|.      |....|.|     .|:|.:.|.|
  Rat   314 PAQPLFLVPGAKPCCAALPGSMRSLRVRTTSDGGYSFKYEMV-----PNLITQHCAC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 3/7 (43%)
TGF_beta_BMP5_like 353..455 CDD:381639 33/129 (26%)
InhaNP_036722.1 TGF_beta_SF 263..366 CDD:477357 33/125 (26%)

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