DRSC/TRiP Functional Genomics Resources

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Protein Alignment gbb and Gdf7

DIOPT Version :9

Sequence 1:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001299805.1 Gene:Gdf7 / 238057 MGIID:95690 Length:461 Species:Mus musculus


Alignment Length:378 Identity:91/378 - (24%)
Similarity:139/378 - (36%) Gaps:142/378 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 EHGRRLWFDVSNVPNDNYLVMAELRIYQNAN---EGKWLTANREFTITVYAIGTGT---LGQHTM 231
            |.|:...||||::...:.:|.||||:.:..:   :....|......::......||   |.....
Mouse   129 EPGQSFLFDVSSLSEADEVVNAELRVLRRRSPEPDRDSATLLPRLLLSTCPDEAGTAHLLHSRAA 193

  Fly   232 EPLSSVNTTGDYVGWLELNVTEGL---HEWLVKSK------------------------------ 263
            |||....       |...:||:.:   ..|...|:                              
Mouse   194 EPLGGAR-------WEAFDVTDAVQSHRRWPRASRKFCLVLRAVTASESSPLALRRLGFGWPGGG 251

  Fly   264 DNHGIYIGAHAV----NRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSK 324
            |..|......|:    :|..|:..|                     ||.   |:|.|     |:.
Mouse   252 DGGGTAAEERALLVISSRTQRKESL---------------------FRE---IRAQA-----RAL 287

  Fly   325 RSASHP-----------------RKRKKSVSPNNVPLLEPMESTRS------------------- 353
            |:|:.|                 |:|:::.          :..||.                   
Mouse   288 RAAAEPPPDPGPGAGSRKANLGGRRRRRTA----------LAGTRGAQGSGGGGGGGGGGGGGGG 342

  Fly   354 -----------------CQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHA 401
                             |..::|::|||:|||.||||||..|.|::|.|.|:|||.:|:..||||
Mouse   343 GGGGGAGRGHGRRGRSRCSRKSLHVDFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHA 407

  Fly   402 IVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454
            |:|||::.:.|...|..||.|.||..:.:||.....||..|:|.:|:|::|||
Mouse   408 IIQTLLNSMAPDAAPASCCVPARLSPISILYIDAANNVVYKQYEDMVVEACGC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 29/174 (17%)
TGFB 354..455 CDD:214556 49/101 (49%)
Gdf7NP_001299805.1 TGFb_propeptide <87..232 CDD:279078 23/109 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..360 7/82 (9%)
TGFB 363..461 CDD:214556 48/98 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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